| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1098 |
|---|
| Symbol | |
|---|
| ID | 8132027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 1282217 |
|---|
| End bp | 1282621 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644864380 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_003016682 |
|---|
| Protein GI | 253687492 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCA GTGATGTTGC GAAAAAAACC GGTCTCAGCA GTAAAACCAT TCGCTTCTAT
GAAGAAAAAG AACTTCTGAC TACGCCGCTG CGTTCTGAAA ATGGTTACCG TAGCTACGAC
GACCATCACG TCGAAGAGCT TACGCTGCTG CGTCAGGCTC GTCAGGTTGG CTTTAATCTG
GATGAATGCC GGGAACTGGT GACGCTATTT AACGATCCGC TGCGGCGAAG TGCGGATGTC
AAAGCGCGTA CCTTGCAGAA AGTGCAGGAA ATCGAGATGC ATATCGAAGA GTTGAAAGCG
ATGCGTGAAC AGTTGCTGGC GCTGGCCGAA CAGTGTCCAG GTGACGGCGG AGCGGACTGT
CCAATAATCA ATAATCTGGC GGGCTGTTGT CAGAAAAGTA AGTAG
|
|---|
| Protein sequence | MNISDVAKKT GLSSKTIRFY EEKELLTTPL RSENGYRSYD DHHVEELTLL RQARQVGFNL
DECRELVTLF NDPLRRSADV KARTLQKVQE IEMHIEELKA MREQLLALAE QCPGDGGADC
PIINNLAGCC QKSK
|
|---|
| |