Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1093 |
Symbol | |
ID | 8132022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1276254 |
End bp | 1276733 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644864375 |
Product | hypothetical protein |
Protein accession | YP_003016677 |
Protein GI | 253687487 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00011] ybaK/ebsC protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACCCG CAGTCAATCT GCTCGAAAAG AATAAGGTCG CTTTTACGTT ACACAGCTAC CACCACGACA GCGATGAAAC CAACTTTGGC GAGGAAGCGG CCAGAAAGCT GGGACTGAAT AAAGAACAGG TTTATAAAAC GCTGCTCGTT TCCCTGAATG GTGATGCGAA GAATCTCGCC GTGGCCGTCA CGCCGGTCTC AGGAATGCTG GATCTCAAGA AAGTTGCTCG CGCGCTGTCG GCCAAAAAAG CCGATATGGC CGATCCGATT ATCGCTCAGC GTGTCACAGG TTATCTGGTA GGAGGAATCA GCCCGCTGGG GCAAAAGAAA CTGCTGCCGA CCGTGATTGA TGAACCGGCA CGCCAGTTCG AGACCATTTT CATTTCCGGC GGTAAGCGCG GTCTGGATAT TGAGCTATCG GCAGACGATC TGGCGCGACT GCTACGCGCC ACCTTTGCTG ATATCGCCAA GCATGATTAA
|
Protein sequence | MTPAVNLLEK NKVAFTLHSY HHDSDETNFG EEAARKLGLN KEQVYKTLLV SLNGDAKNLA VAVTPVSGML DLKKVARALS AKKADMADPI IAQRVTGYLV GGISPLGQKK LLPTVIDEPA RQFETIFISG GKRGLDIELS ADDLARLLRA TFADIAKHD
|
| |