Gene PC1_1086 details

Gene Information

• Locus tag: PC1_1086
• ID: 8132015
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1265716
• End bp: 1267713
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 644864369
• Product: coagulation factor 5/8 type domain protein
• Protein accession: YP_003016671
• Protein GI: 253687481

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.522215
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGACA TCAATATTGA AATCAATGTT TGCGACAGTA CAGGTAAAGC AACATGTACC 
GTTCATCCCC CTGTTTGCTG TCATTCAGAT AACGGAAGCG GTCAAGAGCC TGGTGTCTCG 
GGTGTTGCCT CCGTATTCGG GCGTACCGGT GTCGTAACCG CACAATCCGG TGACTACACG 
GCCGATCAGA TCACCGAAAC CGCCACCAGA AAATTTGCCA CGCCGGATGA AAAAGCGGTC 
TGGAATGCAA AGCAGGATGA GTTAGTTTCT GGCAGCACTA TCCGCACGCT CTTTGGTCAG 
TCGCTGCTGG GCAGCGGTGA TGTTTCACTA ACGCCAGCAC AAATGGGTGT TGCGGCTGTC 
GGACACACCC ATACCACAGC GGAAATCACC GACTACACAC AAAAAACAAA ACAGCTTATT 
CATTCCTCAC TGGAAGCGGG GGCGGGCGTC ACGCTGAGCT ATAACCCTGC GAATGAGAAA 
ACCATTATCA GCGCTGCGGG CGGTGGTTCC GGTAGCGGTG GCTCTGGCTA TATCGTTGCC 
GATCGTCAGG GCGCAACGGC AGGGCAAAAT CACGCGTTCA GCATTAGCCC ACAAGGCACG 
TTTAATCTCG CGGCGTACGC GCTGAAAGAA GAAGCGGGTG CAGCAAATCA GACTTACGCC 
GTTGATGACT TTAATGCATC GAGTGAGCCT AATTATAACG CGACGAGTGC GGTTGTTTTG 
GACGGCGCAA TGCATGAATA TACCGGCGGT ATATTTACAC TTGATAATCA TGACGGCATT 
TATTCTGCAC CAGTTCGAAC TGATGGAAAG TTGATTAATC TTTCCGTTGT TGAAAAATCT 
GTTGTTCCGA AAATGACATC AAATACAAAT CCAGTCGGCT ATGTTATTAG TGCCAGTGAT 
ATGTCCAGAC CTCAATTTTT ACCCTACTTT GCATTTGATA ATGACAATAA TCTATCTAGT 
AATGAATATG ATTGTTGGGG GGCGTTAAAT GCCGCGACCG TAGATAATCC CCATTGGATT 
AGAGTTGACC TGCCAGTCCC GACGAAAATT TCCGGTTATA GCTTTGCTAA CAGGACGGTC 
ATTTATAATA ATGGCCCGAA AAACTGGATT TTTCAGGGGT CTAATGATGG GGGGGCAAGT 
TGGGATGATT TGCATGTTGT AAATAATGAT GTCAATAATA CGCTCGGTGC TGTCCGTAAT 
TATAGTTTCT CTCCCGCTGG AGAATATAAG AGCTTTCGAC TGTTTGTTAC CGCTGGTGGC 
AACAACAATA ACTACCTGAC ATTAAAGAAG CTTAACTTAT TCCAGGCTGG AAAGGTTTTA 
ATTAGCAGCA ATGATAAATG GTATTCTGCA AATAATGGAG AATTGACTGA GATTTCCTCG 
GCTGATTTTG ACAGCGGATT CATTAATTCA GGTTGGATAT CAAATGAATC AATCTCTGAT 
TTGTTACCAA TCAAGATTAT TGGTAATGCT CAAATTGATT TACTGTCGTC GTATATTCCT 
TATACACAAA TTGCCATTCA AAAATCACTG ACGTCCGCTG CATGGGTAAA AATCAATGCC 
GCAACGTTAA CGGCAACGCA GACGGGCAAC GGTAAAGTCC GTGTTGCTGT GACGCGGGAT 
TTGGTGAACT GGCATGTTTT GCGCAACGGG GCGTGGGTTG ATATCGGCGC GCTGTCAGCC 
GATACGGCAG GGGCTATGAC GTTGATTGCT GACGGTATGA CGCCAGCTGA ACTCGGCGCA 
ATTACGGCGG CACAGTGGAC ACAGCTGTTT GCATCCAATA ACGGCGTGCC GGATTCGCTT 
GCCTTTGCCT TCGCGCTTGA TATCACCGAT CCAGCGGCCG ATGTCGCGAC CATTGACCGG 
TTGGTGCTGA ACGTTAACGA TGCGTCCAAC TGGAAAGTGC AGTCTCCTGC GGAAGTAGAA 
ATCCGCTGGC GCACGGACAG CGTGACATTC CGCACCGTAA CGGCAGGTAA TTACAAACTG 
GCGTATCAGG TTCCGTAA 

 

Protein sequence

MKDINIEINV CDSTGKATCT VHPPVCCHSD NGSGQEPGVS GVASVFGRTG VVTAQSGDYT 
ADQITETATR KFATPDEKAV WNAKQDELVS GSTIRTLFGQ SLLGSGDVSL TPAQMGVAAV 
GHTHTTAEIT DYTQKTKQLI HSSLEAGAGV TLSYNPANEK TIISAAGGGS GSGGSGYIVA 
DRQGATAGQN HAFSISPQGT FNLAAYALKE EAGAANQTYA VDDFNASSEP NYNATSAVVL 
DGAMHEYTGG IFTLDNHDGI YSAPVRTDGK LINLSVVEKS VVPKMTSNTN PVGYVISASD 
MSRPQFLPYF AFDNDNNLSS NEYDCWGALN AATVDNPHWI RVDLPVPTKI SGYSFANRTV 
IYNNGPKNWI FQGSNDGGAS WDDLHVVNND VNNTLGAVRN YSFSPAGEYK SFRLFVTAGG 
NNNNYLTLKK LNLFQAGKVL ISSNDKWYSA NNGELTEISS ADFDSGFINS GWISNESISD 
LLPIKIIGNA QIDLLSSYIP YTQIAIQKSL TSAAWVKINA ATLTATQTGN GKVRVAVTRD 
LVNWHVLRNG AWVDIGALSA DTAGAMTLIA DGMTPAELGA ITAAQWTQLF ASNNGVPDSL 
AFAFALDITD PAADVATIDR LVLNVNDASN WKVQSPAEVE IRWRTDSVTF RTVTAGNYKL 
AYQVP