Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1083 |
Symbol | ushA |
ID | 8132012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1259466 |
End bp | 1261115 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864366 |
Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
Protein accession | YP_003016668 |
Protein GI | 253687478 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000234705 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTTT CAATAAAAGC TCTGGGATGT GCGATGGCGG TATCGCTGGC GCTAACGCCT GTTATGTCAA TGGCTTGGGA GAAAGATAAA ACATACGCCA TCACCATTTT GCATACGAAT GACCACCACG GCCACTTCTG GCATAACGAC TACGGTGAAT ATGGGCTGGC GGCGCAAAAA ACGCTGGTCG ATCAGATTCG TCAGGAAGTG GCGAGTAAAG GCGGCAGCGT GTTGCTGCTT TCCGGCGGTG ATATTAATAC TGGCGTGCCT GAGTCCGACC TGCAGGATGC GGAGCCCGAT TTTCGTGGTA TGAACATGGT TGGCTATGAT GCGATGGCGC TCGGCAACCA CGAATTTGAT AATCCGCTGT CTGTCCTGCG TCAGCAGGAG AAATGGGCAA AATTCCCGCT GTTATCGGCC AATATCTACC AAAAAAGCAC CAATCAGCGC TTATTTAAGC CTTATGCCCT GTTCGACAAG CAAGGTGTGA AAATCGCGGT TATCGGCCTG ACAACGGACG ATACGGCCAA ATTAGGCAAT CCTGAGTATT TTACCGATAT CGAATTCCGT AATCCTTCTA CGGAAGCGAA GCAGGTTGTT GAGCAATTAC GGAAGAGTGA AAAGCCTGAC GTGATTATTG CTGCGACGCA CATGGGGCAC TATGACGACG GTAATCACGG TTCCAATGCA CCGGGTGATG TAGAAATGGC GCGTAGCCTG CCAGCCGGCT ATTTGGACAT GATTGTCGGG GGGCACTCGC AAGATCCGGT CTGTATGGCG CAGGAAAATA AAAAACAGGT GGATTATGTG CCGGGCACGC CTTGTGCTCC CGATCGTCAG AACGGCACCT GGATTGTTCA GGCGCATGAG TGGGGGAAAT ATGTTGGCCG TGCTGATTTC ACATTCCGCA ATGGTGAATT GAAGCTTGAG CATTACCAAC TGATCCCAAT CAACCTGAAG AAAAAGGTAG AAAAGGACGG CAAGACCGAA CGTGTTTTCT ATACACAGGA AATCACGCAG GATGCTGACG TCATGAAAAT GCTAACGCCG TTCCAGGAGA AAGGACAGGC GCAGCTGGGC ATCAAGATCG GTAGTGTGAA AGGCAAACTG GAAGGCGATC GTAATCAGGT GCGTTTCCGT CAGACCAATC TGGCACACGT GCTGTTGTCG GCACAGCTTG AGCGTGCAGA GGCGGATTTT GCCATTATGA GCGGTGGTGG CGTACGTGAC TCGATTGAAT CAGGCGATAT CACCTATAAA GATGTCCTTA AGGTTCAGCC GTTTGCCAAT ACGCTGGTTT ATGTGGATAT GAAAGGCAGT GATGTCGAGA AATACCTGGC CGTAGCCGCG AATAAAAAGG TGGATTCCGG CGCCTATGCG CAATTCCTCA ACGTCAGCCT GACGGCGGAC GGACAGGGCG TACAGAACGT GAAAATTAAA GGTGAGCCGT TGCAGGCAGA TAAAGTCTAC CGCATGGCAA CGCTGAATTT TAATGCTATG GGCGGTGATG GCTACCCGCG TCTTGATAAC CTGCCGGGCT ATGTGAACAC CGGTTTTGTC GATGCTGAAG TGCTGAAGCA GTACATCGAG AAGCATTCTC CGCTAAATGC GGAAGCCTAC GCACCGAAAG GTGAGATCGT TTATAAATAA
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Protein sequence | MRFSIKALGC AMAVSLALTP VMSMAWEKDK TYAITILHTN DHHGHFWHND YGEYGLAAQK TLVDQIRQEV ASKGGSVLLL SGGDINTGVP ESDLQDAEPD FRGMNMVGYD AMALGNHEFD NPLSVLRQQE KWAKFPLLSA NIYQKSTNQR LFKPYALFDK QGVKIAVIGL TTDDTAKLGN PEYFTDIEFR NPSTEAKQVV EQLRKSEKPD VIIAATHMGH YDDGNHGSNA PGDVEMARSL PAGYLDMIVG GHSQDPVCMA QENKKQVDYV PGTPCAPDRQ NGTWIVQAHE WGKYVGRADF TFRNGELKLE HYQLIPINLK KKVEKDGKTE RVFYTQEITQ DADVMKMLTP FQEKGQAQLG IKIGSVKGKL EGDRNQVRFR QTNLAHVLLS AQLERAEADF AIMSGGGVRD SIESGDITYK DVLKVQPFAN TLVYVDMKGS DVEKYLAVAA NKKVDSGAYA QFLNVSLTAD GQGVQNVKIK GEPLQADKVY RMATLNFNAM GGDGYPRLDN LPGYVNTGFV DAEVLKQYIE KHSPLNAEAY APKGEIVYK
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