Gene PC1_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1058 
Symbol 
ID8131987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1231976 
End bp1233742 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content54% 
IMG OID644864341 
Productputative multidrug transporter membraneATP-binding components 
Protein accessionYP_003016643 
Protein GI253687453 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.61208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGACTGT TTGCTCAACT GAGTTGGTAT TTTCGCCGTG AATGGCGGCG CTATCTGGGT 
GCCATTGCGC TATTGATTGT GATTGCCATT CTGCAATTGC TTCCTCCTAA ACTGGTTGGC
GTGATCGTCG ATGGCGTGAC GCAACACGGC ATGTCGATGG CCGAAATGAT GAAGTGGATT
GGCGTGATGC TGCTGACTGC CGTCATGGTT TATCTGCTGC GTTACGTGTG GCGAGTGTTC
CTGTTTGGCG CCTCATATCA GTTAGCGGTT GAGCTACGCG AGGATTTTTA CCGTCAACTG
AGCCGCCAGC ATCCGGCGTT TTACCAGCGC CACCGTACCG GCGATCTGAT GGCGCGTGCT
ACTAACGATG TCGATCGCGT GGTCTTTGCC GCCGGGGAAG GGGTGTTGAC GTTGGTCGAC
TCGATGGTGA TGGGTTGTGC TGTGCTGGTT GTCATGTGTA CTCAAATCAG CTGGGAACTC
ACCCTGCTGG CGCTGCTTCC GATGCCAGTT ATGGCGATTT TCATCAAACG CTACGGCACC
CAGTTGCATA ACCGTTTCAA ATCCGCACAG GCGGCGTTTT CTTCGCTTAA CGATCAGGCG
CAGGAAAGCT TGACCAGCAT TCGCATGATT AAAGCCTTTG GACTGGAAAA CTATCAATCT
GCGCGTTTTG CGCAGGTTGC GGCGGATGCT GGGGCTAAAA ACATGCACGT TGCCCGAGTT
GATGCCCGCT TCGACCCCAC TATTTATATT GCCGTCGGGC TGTCAAATTT GCTGGCTATT
GGCGGCGGCA GTTGGATGGT GATTAACGGT TCGCTGACGT TAGGCTCGTT GACCAGTTTT
GTCATGTATC TGGGATTGAT GATATGGCCG ATGCTGGCGC TGGCCTGGAT GTTTAATATT
GTTGAGCGTG GTAGCGCGGC ATATAGCCGT ATTCGTCAGC TACTTGCGGA AGATCTTGTG
GTGAAAGACG GTGAGGAATC ATTGCCTGCC GAACGGGGCG TGTTGGCGGT GAATATTTCC
ACGTTTCGCT ATCCGGATAA TGCCCGCGAT GCCTTACAGC ATATTCAGTT TACGCTGGCT
CCAGGCAATA TGTTGGGATT ATGTGGACCG ACGGGGTCGG GGAAAAGTAC GCTGCTGGCG
CTGATTTTGC GTCATTTCGA TACCCCATCG GGAGAGATTC GTTATCACGA CCGCCCGTTG
AATGCTATTC GGCTGGATGA GCTACGGAGT CGTTTTGCCG TTGTCGGGCA AATGCCCTTT
TTGTTTTCGG ACACGGTAGC GCAAAACATC GCACTGGGTC GACCTGATGC GACGCAGCAA
GAGATTGAAC AGGCGGCTCG GCTTGCCAGC GTTCATGACG ATATTCTGCG TTTGCCTCAT
GGCTATCAGA CTGAGGTGGG TGAGCGTGGT GTGATGCTAT CTGGCGGTCA AAAACAGCGG
ATCGCGATTG CCCGGGCGTT ACTGCTGGAT GCTGAAATTC TGGTGTTGGA TGATGCGTTG
TCTGCGGTGG ATGGGCGAAC GGAGCACCAG ATTTTGCAAA ATCTTAAAAC ATGGGGCGAA
AAACGGACAC TGATCATCAG CGCACATCGC CTGTCGGCTC TCACTGAAGC AAATGAAATC
GTGGTGTTGC AGCAAGGACA AACGGTGCAG CGTGGCACAC ACCGGACGCT GGCGGCAGAA
CCCGGCTGGT ATCGGGATAT GTACCGCTAT CAACAGTTGG AAGCGGCGCT GGATGATGTG
CCGCAGGCGG AAGGAAAGAG AGGATGA
 
Protein sequence
MRLFAQLSWY FRREWRRYLG AIALLIVIAI LQLLPPKLVG VIVDGVTQHG MSMAEMMKWI 
GVMLLTAVMV YLLRYVWRVF LFGASYQLAV ELREDFYRQL SRQHPAFYQR HRTGDLMARA
TNDVDRVVFA AGEGVLTLVD SMVMGCAVLV VMCTQISWEL TLLALLPMPV MAIFIKRYGT
QLHNRFKSAQ AAFSSLNDQA QESLTSIRMI KAFGLENYQS ARFAQVAADA GAKNMHVARV
DARFDPTIYI AVGLSNLLAI GGGSWMVING SLTLGSLTSF VMYLGLMIWP MLALAWMFNI
VERGSAAYSR IRQLLAEDLV VKDGEESLPA ERGVLAVNIS TFRYPDNARD ALQHIQFTLA
PGNMLGLCGP TGSGKSTLLA LILRHFDTPS GEIRYHDRPL NAIRLDELRS RFAVVGQMPF
LFSDTVAQNI ALGRPDATQQ EIEQAARLAS VHDDILRLPH GYQTEVGERG VMLSGGQKQR
IAIARALLLD AEILVLDDAL SAVDGRTEHQ ILQNLKTWGE KRTLIISAHR LSALTEANEI
VVLQQGQTVQ RGTHRTLAAE PGWYRDMYRY QQLEAALDDV PQAEGKRG