Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1058 |
Symbol | |
ID | 8131987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1231976 |
End bp | 1233742 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864341 |
Product | putative multidrug transporter membraneATP-binding components |
Protein accession | YP_003016643 |
Protein GI | 253687453 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.61208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGACTGT TTGCTCAACT GAGTTGGTAT TTTCGCCGTG AATGGCGGCG CTATCTGGGT GCCATTGCGC TATTGATTGT GATTGCCATT CTGCAATTGC TTCCTCCTAA ACTGGTTGGC GTGATCGTCG ATGGCGTGAC GCAACACGGC ATGTCGATGG CCGAAATGAT GAAGTGGATT GGCGTGATGC TGCTGACTGC CGTCATGGTT TATCTGCTGC GTTACGTGTG GCGAGTGTTC CTGTTTGGCG CCTCATATCA GTTAGCGGTT GAGCTACGCG AGGATTTTTA CCGTCAACTG AGCCGCCAGC ATCCGGCGTT TTACCAGCGC CACCGTACCG GCGATCTGAT GGCGCGTGCT ACTAACGATG TCGATCGCGT GGTCTTTGCC GCCGGGGAAG GGGTGTTGAC GTTGGTCGAC TCGATGGTGA TGGGTTGTGC TGTGCTGGTT GTCATGTGTA CTCAAATCAG CTGGGAACTC ACCCTGCTGG CGCTGCTTCC GATGCCAGTT ATGGCGATTT TCATCAAACG CTACGGCACC CAGTTGCATA ACCGTTTCAA ATCCGCACAG GCGGCGTTTT CTTCGCTTAA CGATCAGGCG CAGGAAAGCT TGACCAGCAT TCGCATGATT AAAGCCTTTG GACTGGAAAA CTATCAATCT GCGCGTTTTG CGCAGGTTGC GGCGGATGCT GGGGCTAAAA ACATGCACGT TGCCCGAGTT GATGCCCGCT TCGACCCCAC TATTTATATT GCCGTCGGGC TGTCAAATTT GCTGGCTATT GGCGGCGGCA GTTGGATGGT GATTAACGGT TCGCTGACGT TAGGCTCGTT GACCAGTTTT GTCATGTATC TGGGATTGAT GATATGGCCG ATGCTGGCGC TGGCCTGGAT GTTTAATATT GTTGAGCGTG GTAGCGCGGC ATATAGCCGT ATTCGTCAGC TACTTGCGGA AGATCTTGTG GTGAAAGACG GTGAGGAATC ATTGCCTGCC GAACGGGGCG TGTTGGCGGT GAATATTTCC ACGTTTCGCT ATCCGGATAA TGCCCGCGAT GCCTTACAGC ATATTCAGTT TACGCTGGCT CCAGGCAATA TGTTGGGATT ATGTGGACCG ACGGGGTCGG GGAAAAGTAC GCTGCTGGCG CTGATTTTGC GTCATTTCGA TACCCCATCG GGAGAGATTC GTTATCACGA CCGCCCGTTG AATGCTATTC GGCTGGATGA GCTACGGAGT CGTTTTGCCG TTGTCGGGCA AATGCCCTTT TTGTTTTCGG ACACGGTAGC GCAAAACATC GCACTGGGTC GACCTGATGC GACGCAGCAA GAGATTGAAC AGGCGGCTCG GCTTGCCAGC GTTCATGACG ATATTCTGCG TTTGCCTCAT GGCTATCAGA CTGAGGTGGG TGAGCGTGGT GTGATGCTAT CTGGCGGTCA AAAACAGCGG ATCGCGATTG CCCGGGCGTT ACTGCTGGAT GCTGAAATTC TGGTGTTGGA TGATGCGTTG TCTGCGGTGG ATGGGCGAAC GGAGCACCAG ATTTTGCAAA ATCTTAAAAC ATGGGGCGAA AAACGGACAC TGATCATCAG CGCACATCGC CTGTCGGCTC TCACTGAAGC AAATGAAATC GTGGTGTTGC AGCAAGGACA AACGGTGCAG CGTGGCACAC ACCGGACGCT GGCGGCAGAA CCCGGCTGGT ATCGGGATAT GTACCGCTAT CAACAGTTGG AAGCGGCGCT GGATGATGTG CCGCAGGCGG AAGGAAAGAG AGGATGA
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Protein sequence | MRLFAQLSWY FRREWRRYLG AIALLIVIAI LQLLPPKLVG VIVDGVTQHG MSMAEMMKWI GVMLLTAVMV YLLRYVWRVF LFGASYQLAV ELREDFYRQL SRQHPAFYQR HRTGDLMARA TNDVDRVVFA AGEGVLTLVD SMVMGCAVLV VMCTQISWEL TLLALLPMPV MAIFIKRYGT QLHNRFKSAQ AAFSSLNDQA QESLTSIRMI KAFGLENYQS ARFAQVAADA GAKNMHVARV DARFDPTIYI AVGLSNLLAI GGGSWMVING SLTLGSLTSF VMYLGLMIWP MLALAWMFNI VERGSAAYSR IRQLLAEDLV VKDGEESLPA ERGVLAVNIS TFRYPDNARD ALQHIQFTLA PGNMLGLCGP TGSGKSTLLA LILRHFDTPS GEIRYHDRPL NAIRLDELRS RFAVVGQMPF LFSDTVAQNI ALGRPDATQQ EIEQAARLAS VHDDILRLPH GYQTEVGERG VMLSGGQKQR IAIARALLLD AEILVLDDAL SAVDGRTEHQ ILQNLKTWGE KRTLIISAHR LSALTEANEI VVLQQGQTVQ RGTHRTLAAE PGWYRDMYRY QQLEAALDDV PQAEGKRG
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