| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1056 |
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| Symbol | |
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| ID | 8131985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1229991 |
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| End bp | 1231067 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864339 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_003016641 |
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| Protein GI | 253687451 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.198203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATG CCTGGGTTAA AAATGCCATC AGCGCTATCG AAGCAGATTT TCAGCGTTCG
GCTGATACGC ATCTTATCCG TTTGACCCTT CCGGATTATC CCGGTATTTA TTTTTACCTT
AAAGATGAAA GCACACACCC CAGCGGCAGC CTGAAACATC GTCTGGCGCG TTCTTTGTTT
CTCTATGGGC TGTGCAACGG TTGGATTAAA GAAGGCACGC CGATTATTGA AGCGTCATCC
GGCAGCACAG CGGTATCAGA AGCCTATTTT GCCCGCCTGC TTGGCCTGCC GTTTATCGCC
GTTATGCCCT CCTGCACCGC AAAAAGAAAA ATTGAGCAAA TCGCGTTCTA TGGTGGACGC
TGTCATTTTG TCGAACAGGC GGGGCAAATC TATGCGGCAT CAGAACAGCT CGCACAAGAG
ATGAACGGCC ACTATATGGA TCAGTTCACC TACGCAGAAC GCGCCACCGA CTGGCGCGGC
AACAATAACA TTGCCGACAG CATTTACCGC CAAATGGCAC GAGAACCGTA TCCTGTACCG
GACTATATCG TGATGAGCGC CGGAACGGGC GGTACATCGG CAACACTCGG GCGCTACATT
CGCTATCAGG GGCTGGATAC ACAACTGGTC GTCGTCGATC CAGAAAATTC AGTCTTCTAC
GATTGCTACC AGCAGCGGGA TCGCTCAATC ACAGGTCCGT GCGGTAGCCG GATAGAAGGT
ATTGGTCGTC CACGAGCAGA ACCTTCTTTT ATTCCTGACG TCATTGATAG CATGCTCAAA
GTGCCTGACG CAGCCAGCAT CGCAACGCTG TACTGGCTGG AAAGTGTATT AGGCCGCAAA
GCAGGTGCCT CTACCGGTAC GAATGTTTGG GGTATGCTGC AATTAGCCAA AGAAATGATG
AGCCACGGTC AAAAAGGAGC GATTGTAACT CTGCTGTGTG ACAGCGGAGA ACGTTATCTG
GATACCTACT ACAACAGTAG TTGGGTAGAA AAAAATATCG GCGACATTAG CCCGTACCTT
GATGCTCTAA ACATCCCAGA GATGTCCCAT CTCATACCTG AACCCAGTCT GGCGTAA
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| Protein sequence | MTNAWVKNAI SAIEADFQRS ADTHLIRLTL PDYPGIYFYL KDESTHPSGS LKHRLARSLF
LYGLCNGWIK EGTPIIEASS GSTAVSEAYF ARLLGLPFIA VMPSCTAKRK IEQIAFYGGR
CHFVEQAGQI YAASEQLAQE MNGHYMDQFT YAERATDWRG NNNIADSIYR QMAREPYPVP
DYIVMSAGTG GTSATLGRYI RYQGLDTQLV VVDPENSVFY DCYQQRDRSI TGPCGSRIEG
IGRPRAEPSF IPDVIDSMLK VPDAASIATL YWLESVLGRK AGASTGTNVW GMLQLAKEMM
SHGQKGAIVT LLCDSGERYL DTYYNSSWVE KNIGDISPYL DALNIPEMSH LIPEPSLA
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