| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1050 |
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| Symbol | |
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| ID | 8131979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1223007 |
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| End bp | 1225388 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864333 |
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| Product | DNA-binding ATP-dependent protease La |
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| Protein accession | YP_003016635 |
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| Protein GI | 253687445 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.362366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCTG AGCGTTCCGA ACGCATAGAA ATCCCCGTAT TGCCATTGCG CGATGTGGTG
GTTTATCCGC ACATGGTCAT TCCGTTGTTT GTTGGTCGGG AGAAATCGAT TCGGTGCCTT
GAAGCCGCAA TGGATCATGA CAAAAAGATC ATGCTGGTGG CACAGAAAGA AGCTTCAACG
GATGAGCCAA GTATTAACGA TCTTTTCTCG GTAGGGACGG TAGCCTCAAT TCTTCAAATG
CTGAAACTGC CTGACGGTAC GGTAAAAGTA CTGGTCGAGG GGTTGCAGCG TGCCCGTATT
ACGACGCTTT CTGACGGTGG CGAGCATTTC GCGGCAAAAG CCGAATATCT TGACTCCCCG
GCGATTGATG AACGCGAGCA GGAAGTGCTC ATGCGCACGG CAATCAATCA GTTTGAGGGT
TACATCAAGC TGAACAAGAA GATCCCGCCG GAAGTACTGA CATCACTGAA CAGTATTGAT
GATGCCGCGC GCTTAGCCGA CACCATTGCC GCACACATGC CGCTGAAATT GGCTGATAAG
CAGTCGGTAC TTGAAATGTT CGATATTACC GAACGTTTAG AGTATCTGAT GGCGATGATG
GAATCCGAAA TCGACCTGCT GCAGGTAGAA AAACGGATCC GTGGCCGCGT TAAGAAGCAA
ATGGAAAAAA GCCAGCGTGA GTACTATCTG AATGAGCAAA TGAAAGCTAT TCAGAAAGAG
CTGGGTGAGA TGGACGACGC TCCGGATGAA CACGAAGCGT TAAAGCGTAA GATTGAAGCG
GCAAAAATGC CGAAAGACGC ACGTGAGAAA GCCGAAGCTG AACTGCAAAA GCTGAAGATG
ATGTCGCCGA TGTCTGCGGA AGCGACGGTA GTGCGCAGTT ATATCGACTG GATGGTGCAG
GTTCCGTGGA ATGCGCGTAG CAAAGTGAAA AAAGATTTGC TGAAAGCGCA GGAAATGCTG
GATACCGACC ATTATGGTCT GGATCGTGTG AAAGAACGCA TTCTCGAATA TCTCGCGGTA
CAGAGTCGTG TCAGCAAGAT CAAAGGGCCG ATTTTGTGTC TGGTAGGGCC TCCTGGCGTT
GGGAAAACCT CGCTCGGTCA GTCCATCGCC AAAGCGACCG GACGTCAGTA TGTGCGTATG
GCGCTGGGTG GCGTGCGTGA CGAAGCGGAA ATCCGCGGAC ACCGCCGTAC CTATATTGGT
TCTATGCCAG GCAAACTGAT CCAGAAAATG GCGAAAGTTG GCGTGAAAAA CCCGCTGTTC
CTGCTGGATG AGATCGACAA GATGTCTTCC GACATGCGTG GCGATCCTGC TTCTGCGTTG
CTGGAAGTGC TCGATCCTGA GCAGAACGTG GCGTTTAACG ATCATTATCT GGAAGTCGAC
TACGATCTGT CTGATGTCAT GTTTGTGGCG ACGTCTAACT CCATGAACAT CCCGGCGCCG
TTGCTTGACC GTATGGAAGT TATTCGTCTT TCCGGCTATA CCGAAGATGA AAAGCTGAAC
ATCGCCAAAC AGCACCTGTT GCCGAAACAG ATCGAACGTA ACGCGCTGAA GAATGGTGAG
CTGTCGGTAG AAGACAGCGC GATTGTTGGC ATTATCCGTT ATTACACGCG TGAAGCTGGC
GTACGTAGTC TGGAGCGTGA AATCTCCAAG CTGTGCCGTA AAGCAGTAAA AACGCTGTTG
ATGGATAAAT CCACTAAGCA TATTCAGGTT TCGGGCGATA ACCTTAAGGA TTTCCTTGGG
GTACAGCGCT TTGACTATGG CCGCGCGGAC GATGAAAATC GCGTAGGGCA GGTGACCGGT
CTGGCCTGGA CGGAAGTGGG CGGCGATCTG CTGACGATCG AAACCGCCTG TGTGCCGGGT
AAGGGTAAAT TGACCTATAC TGGTTCGTTA GGCGAGGTGA TGCAGGAGTC GATTCAGGCT
GCGCTCACCG TAGTTCGTGC CCGTGCGGAA AAATTAGGCA TCAATGCTGA TTTTTACGAG
AAGCGTGATA TCCACGTTCA CGTTCCTGAA GGTGCGACGC CGAAAGATGG GCCAAGTGCG
GGTATCGCGA TGTGTACCGC GCTGGTTTCT TGTTTGACCG GCAATCCGGT GCGTGCCGAT
GTGGCGATGA CGGGGGAAAT TACCCTGCGT GGTCTGGTAC TGCCGATCGG CGGTCTGAAA
GAGAAATTGC TGGCCGCACA CCGTGGTGGA ATCAAGACAG TATTGATTCC TGATGACAAC
AAACGCGATC TGGAGGATAT CCCACAGAAC GTGATTGCGG ATCTGGAAAT CCATCCGGTG
AAACGTATCG AGGAAGTGTT GGCGTTAGCG TTGCAGAATT CGCCTTCTGG CATGCAAGTG
GTCTCTGCGC CTAAAGCAAA GGCCAAAGCC AAGGCAAAAT AG
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| Protein sequence | MNPERSERIE IPVLPLRDVV VYPHMVIPLF VGREKSIRCL EAAMDHDKKI MLVAQKEAST
DEPSINDLFS VGTVASILQM LKLPDGTVKV LVEGLQRARI TTLSDGGEHF AAKAEYLDSP
AIDEREQEVL MRTAINQFEG YIKLNKKIPP EVLTSLNSID DAARLADTIA AHMPLKLADK
QSVLEMFDIT ERLEYLMAMM ESEIDLLQVE KRIRGRVKKQ MEKSQREYYL NEQMKAIQKE
LGEMDDAPDE HEALKRKIEA AKMPKDAREK AEAELQKLKM MSPMSAEATV VRSYIDWMVQ
VPWNARSKVK KDLLKAQEML DTDHYGLDRV KERILEYLAV QSRVSKIKGP ILCLVGPPGV
GKTSLGQSIA KATGRQYVRM ALGGVRDEAE IRGHRRTYIG SMPGKLIQKM AKVGVKNPLF
LLDEIDKMSS DMRGDPASAL LEVLDPEQNV AFNDHYLEVD YDLSDVMFVA TSNSMNIPAP
LLDRMEVIRL SGYTEDEKLN IAKQHLLPKQ IERNALKNGE LSVEDSAIVG IIRYYTREAG
VRSLEREISK LCRKAVKTLL MDKSTKHIQV SGDNLKDFLG VQRFDYGRAD DENRVGQVTG
LAWTEVGGDL LTIETACVPG KGKLTYTGSL GEVMQESIQA ALTVVRARAE KLGINADFYE
KRDIHVHVPE GATPKDGPSA GIAMCTALVS CLTGNPVRAD VAMTGEITLR GLVLPIGGLK
EKLLAAHRGG IKTVLIPDDN KRDLEDIPQN VIADLEIHPV KRIEEVLALA LQNSPSGMQV
VSAPKAKAKA KAK
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