Gene PC1_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1044 
SymbolampG 
ID8131973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1215853 
End bp1217340 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content52% 
IMG OID644864327 
Productmuropeptide transporter 
Protein accessionYP_003016629 
Protein GI253687439 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00901] AmpG-related permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0385615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGTC GCATCATTGC TTTATTCAGC CAACGTAATT CGCTTTTTAT GCTGTTGCTT 
GGCTTCGCTT CCGGTTTACC ACTGGCATTG ACATCAGGCA CATTGCAAGC CTGGATGACT
GTCGAGAATG TCGATCTGAA AACCATCGGT TTTTTCTCTT TGGTTGGTCA AGCCTACGTA
TTCAAGTTTC TGTGGTCCCC CCTCATGGAT CGCTATACCC CACCGTTTCT TGGCAGGCGC
CGTGGCTGGC TGATTCTCAG TCAACTTCTG CTGATTGCTG CGATTATTGG TATGGGATTT
ATGAACCCAG CACGCGATCT CTGGTGGCTG GCGGCGCTGG CCGTGATGGT TGCATTCTGC
TCTGCTTCTC AGGATATCGT TTTTGATGCC TATAAGACGG ATTTACTTCC CCCTGAGGAA
CGCGGTACGG GTGCGGCCAC CTCAGTATTA GGTTACCGTC TGGCCATGCT GGTTTCAGGC
GGACTCGCTC TGTGGATGGC GGATCGCTAT CTCGGCTGGC AGGCAACGTA TTGGCTCATG
GCAGGACTCA TGCTGATCGG TGTGTTCGCA ACCCTATTAG CACCGGAACC GCTAAATAGT
CAGCCTGCGC CGCGCACCAT GGAGCAAGCG ATTGTTGCCC CACTGCGTGA TTTCTTCGAA
CGTAACAACG CCTGGCTCAT TCTTCTGTTG ATCGTGCTAT ACAAACTCGG TGATGCCTTT
GCGATTAGCT TGACGACCAC TTTCCTGATA CGCGGCGTTG GTTTCAATGC CGGTGATGTT
GGGCTGGTTA ACAAGACGCT TGGACTCTTC GCCACCATCG TGGGGGCGAT TTACGGTGGA
TTATTGATGC AGCGACTCTC ATTATTCAGA GCGCTGATGC TGTTTGGCAT CCTTCAGGCC
GTGTCCAATG CGGGGTACTG GCTACTGGCG ATTACCGCCA AAAGCCTATT CACAATGGCT
ACCGCGGTTT TTCTGGAAAA TCTCTGTGGC GGCATGGGGA CAGCAGCGTT CGTCGCGCTC
TTGATGACGC TGTGTAATAA ATCATTCTCA GCCACACAGT TTGCCCTGCT TTCCGCCCTT
GCAGCCGTCG GACGGGTGTA CGTCGGCCCT ATCGCAGGTT GGTTTGTCGA ATCCTACGGC
TGGGCATGGT TCTATCTATT CTCGATTTTG GCTGCATTGC CGGGTCTGGC AATTCTAATG
ATTTGCCGTG AGACGCTGGA ATTTACTCAG AAAACGGACA CCTTCCAGTT ACGCACACAC
TTCCAGAATT ATTACAGAAA GGCCTTACAT ATACTGGGGT CAGGGGTGGT ATTACTGGCA
CTGTGGCTTA TTCTGCTCAT CAGTAATGCG TTGGAATGGT CTTCATTGCC CTTACTGGCA
GAATACCTGC TCATCGCAGG CGGTACGCTC GCGCTGCTGG GCATTTTCTT CGGTAGCTTG
CTGGACTATC TGTCACTCAA ACGCGCGTCC AGACCGTCTG TGCACTAA
 
Protein sequence
MFSRIIALFS QRNSLFMLLL GFASGLPLAL TSGTLQAWMT VENVDLKTIG FFSLVGQAYV 
FKFLWSPLMD RYTPPFLGRR RGWLILSQLL LIAAIIGMGF MNPARDLWWL AALAVMVAFC
SASQDIVFDA YKTDLLPPEE RGTGAATSVL GYRLAMLVSG GLALWMADRY LGWQATYWLM
AGLMLIGVFA TLLAPEPLNS QPAPRTMEQA IVAPLRDFFE RNNAWLILLL IVLYKLGDAF
AISLTTTFLI RGVGFNAGDV GLVNKTLGLF ATIVGAIYGG LLMQRLSLFR ALMLFGILQA
VSNAGYWLLA ITAKSLFTMA TAVFLENLCG GMGTAAFVAL LMTLCNKSFS ATQFALLSAL
AAVGRVYVGP IAGWFVESYG WAWFYLFSIL AALPGLAILM ICRETLEFTQ KTDTFQLRTH
FQNYYRKALH ILGSGVVLLA LWLILLISNA LEWSSLPLLA EYLLIAGGTL ALLGIFFGSL
LDYLSLKRAS RPSVH