| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1043 |
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| Symbol | |
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| ID | 8131972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1214465 |
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| End bp | 1215427 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644864326 |
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| Product | cytochrome o ubiquinol oxidase subunit II |
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| Protein accession | YP_003016628 |
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| Protein GI | 253687438 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR01433] cytochrome o ubiquinol oxidase subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0760278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACTCA AGAAATACAA TAAAATTTTT GGGATGCTGT CTTTATTTGC AGCCACTGTT
CTACTGAGCG GTTGCGATAT GGCGCTGATG AACCCCAAAG GAGAGATCGG GTTAGAACAA
AGATCGCTAA TACTGACTGC CATCGGGCTG ATGTTGATCG TTGTGATTCC CGTTATCGTT
ATGACGATAG CTTTTGCCTG GAAGTTCCGT GCTTCCAATG AAAAGGCAAA ATATACCCCG
AACTGGTCAC ACTCCAACAA GATAGAAGCT GTAGTCTGGA CTGTACCAAT TATCATTATC
GTTATTCTTG GCACGATTAC CTGGAAGACG ACCCACTCGC TTGACCCGTA CAAGCCACTG
GTATCAGACG TCAAACCAAT CAATGTCGAA GTCATTTCGC TTGATTGGAA ATGGTTGTTT
GTTTACCCAG ACCTTGGTAT CGCTACGGTT AACGAATTGG CTTTCCCTGC CAACGTGCCT
GTTGCATTCA AGATCACATC CGACTCTGTG ATGAACTCCT TCTTCATTCC TCGTCTTGGT
GGACAGATTT ACGCAATGGC CGGAATGCAG ACGAAGCTTC ACTTGATCGC TAACGAACCG
GGCAAGTATG ACGGTATCTC TGGCGGTTAT AGTGGTAAAG GCTTCTCTGG AATGAAGTTC
ACCGCGATTG CCACACCAAC TCAACAAGAG TTCGACCAGT GGGTTGCGAA CGTTCGTGCG
TCCTCCAAAA CACTGAATAC TATGGATGAA TTCAACACGT TGGCTAAGCC AAGTGAATTC
CATCCTGTCG AATACTTCTC CAGTGTCCAG CCGGATTTGT TCAATAATAT TATTCGCAAA
TTCATAGGCA ACGACATGAA CATGCAACAT CATGGTGAAG GCATGAAGCC TGACGAAAAC
ATGCAACATG GTGAGGGTAT GAACATGGGC GAGCATAGCT CGCACAAAGG AGCCGAGGGA
TAA
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| Protein sequence | MRLKKYNKIF GMLSLFAATV LLSGCDMALM NPKGEIGLEQ RSLILTAIGL MLIVVIPVIV
MTIAFAWKFR ASNEKAKYTP NWSHSNKIEA VVWTVPIIII VILGTITWKT THSLDPYKPL
VSDVKPINVE VISLDWKWLF VYPDLGIATV NELAFPANVP VAFKITSDSV MNSFFIPRLG
GQIYAMAGMQ TKLHLIANEP GKYDGISGGY SGKGFSGMKF TAIATPTQQE FDQWVANVRA
SSKTLNTMDE FNTLAKPSEF HPVEYFSSVQ PDLFNNIIRK FIGNDMNMQH HGEGMKPDEN
MQHGEGMNMG EHSSHKGAEG
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