| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1038 |
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| Symbol | |
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| ID | 8131967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1209187 |
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| End bp | 1210497 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864321 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_003016623 |
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| Protein GI | 253687433 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.158805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATTG GACAGGCTCT TGATCTGGTA TCCCATTACG ACTCTTTGCG TAACCCACTG
ACTTCTCTGG GGGATTATCT CGACCCCGAA CTCGTCTCAC GTTGTCTCGC CGAGTCCGGC
ACGGTCACGC TACGCAAGCG GCGTCTCCCG CTTGAAATGA TGGTCTGGTG CATTGTCGGC
ATGGCGCTTG AACGTAAAGA GCCCCTTCAC CAGATTGTTA ACCGTCTGGA TATTATGCTG
CCGGGTAACC GTCCCTTTGT CGCCCCGAGT GCCGTGATTC AAGCTCGCCA GCGCCTGGGA
AGTGAGGCGG TTCGCCGTGT GTTCACACAA ACTGCACAGC TCTGGCATAG TGAAACGCCA
CATCCACACT GGTGTGGCCT GACTCTGCTG GCCGTGGATG GCGTGGTCTG GCGAACGCCG
GATACACCAG AAAATGATGC CGCCTTCCCG CGCCAGACAC ATGGCGGAAA ACCGGGACTC
TATCCACAGG TAAAAATGGT CTGCCAGATG GAGCTGACCA GCCATCTGCT CACGGCTGCA
GCCTTTGGCA CGATGAAAGA GAGTGAAAAT GCGCTTGCAG AACAGTTGAT AGCACAGACA
GGTGATAACA CGCTGACTTT ACTCGATAAA GGCTATTACG CACTGGGTTT GCTAAATGCC
TGGAATCAGG CGGGGAAACA CCGGCACTGG CTGATCCCGC TGAAAAAGGG GGGGCAGTAT
GAAGAGGTCA GGAAGCTGGG TAAAGGTGAT CATCTGGTAA AATTGAAAAC CAGTCCACAG
GCCCGTAAAA AGTGGCCGGG TCTGGGGGAG GAAATCACAG CACGGCTACT GACACTGACC
CGCAAAGGAA AGGTCTGTCA TCTGCTGACG TCAATGACGG ATGCGCTGCG CTTCCCTGGT
GGAGAGATGG CGGACCTGTA CAGCCACCGG TGGGAAATCG AGCTGGGCTA CCGTGAGATA
AAGCAGACGA TGCAACTGAG CAGGCTGACA CTGCGAAGTA AGAAACCTGA GCTCGTGGAG
CAGGAGTTAT GGGGAGTATT ACTGGCCTAT AATCTTGTAA GATATCAGAT GATTAAAATG
GCAGGACATC TGAAAGGATA CTGGCCAAAT CAGCTGAGCT TCTCAGAATC GTGCGGAATG
GTGATGCGAA TGCTGATGAC ACTACAGGGT GCTTCACCGG GCCGCATCCC GGAACTAATG
CGTGATCTTG AAAGCCAGGG ACAACTGGTG AAATTACCGA TAAGAAGGGA AAGGGCCTTC
CCACGAATAG TAAAAGAAAG GCCCCAAAAA TACAGTAAGG CCCGTAGATA A
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| Protein sequence | MHIGQALDLV SHYDSLRNPL TSLGDYLDPE LVSRCLAESG TVTLRKRRLP LEMMVWCIVG
MALERKEPLH QIVNRLDIML PGNRPFVAPS AVIQARQRLG SEAVRRVFTQ TAQLWHSETP
HPHWCGLTLL AVDGVVWRTP DTPENDAAFP RQTHGGKPGL YPQVKMVCQM ELTSHLLTAA
AFGTMKESEN ALAEQLIAQT GDNTLTLLDK GYYALGLLNA WNQAGKHRHW LIPLKKGGQY
EEVRKLGKGD HLVKLKTSPQ ARKKWPGLGE EITARLLTLT RKGKVCHLLT SMTDALRFPG
GEMADLYSHR WEIELGYREI KQTMQLSRLT LRSKKPELVE QELWGVLLAY NLVRYQMIKM
AGHLKGYWPN QLSFSESCGM VMRMLMTLQG ASPGRIPELM RDLESQGQLV KLPIRRERAF
PRIVKERPQK YSKARR
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