Gene PC1_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1036 
Symbol 
ID8131965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1207043 
End bp1207534 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content50% 
IMG OID644864319 
Productputative nucleotide-binding protein 
Protein accessionYP_003016621 
Protein GI253687431 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.448426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCTT TCGATATTGT TTCGGAAATT GATATGCAGG AAGTCCGTAA CGCGGTGGAA 
AATGCCACGC GTGAGCTGAG CACACGCTGG GATTTCCGCA ATGTTCCGGC CAGCTTTGAA
CTGAATGAGA AATCGCAAAG CATTAAAGCG ACCAGCGAGT CTGATTTTCA GGTCCAGCAA
CTGATTGATA TTATGCGCGA GAAATTGTTG AAGCGCGGAA TTGAAGGCGG GGCGTTAGAG
GTCCCGGAAG AGTTCGAGCA CAGCGGTAAA ACGTATAGCG TGGAAGCCAA GTTGAAGCAG
GGCATCGAAA CCACGCAGGC GAAGAAAATC GTCAAGCTGA TTAAAGACAG CAAGCTGAAA
GTACAGGCGC AGATTCAGGG TGAGCAAGTT CGCGTTACTG GCAAATCACG TGATGATTTG
CAGGGCGTGA TGGCGTTGAT TCGCGGTGGG AATCTGGGGC AGCCGTTCCA GTTTACCAAC
TTCCGGGATT GA
 
Protein sequence
MPSFDIVSEI DMQEVRNAVE NATRELSTRW DFRNVPASFE LNEKSQSIKA TSESDFQVQQ 
LIDIMREKLL KRGIEGGALE VPEEFEHSGK TYSVEAKLKQ GIETTQAKKI VKLIKDSKLK
VQAQIQGEQV RVTGKSRDDL QGVMALIRGG NLGQPFQFTN FRD