Gene PC1_1026 details

Gene Information

• Locus tag: PC1_1026
• Symbol: ribH
• ID: 8131955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1198019
• End bp: 1198495
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644864309
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_003016611
• Protein GI: 253687421
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGTTA TCGAAGGTGT TGTTGCTACT CCTGATGCCC GTGTGGCGAT TGCGATTGCG 
CGTTTTAACC ATTTTATTAA CGACAGCCTG CTGGAAGGTG CGATTGATGC ATTGAAACGC 
ATCGGTCAGG TTAAAGACGA AAATATCACC GTTGTTTGGG TGCCGGGTGC TTACGAACTG 
CCATTGACGG TTCGTGCGCT GACTAAAAGC GCGAAAAACG GCGGGTATGA TGCCGTTATC 
GCTCTGGGAA CGGTTATCCG TGGTGGAACA GCGCATTTTG AATTTGTTGC TGGCGAATGT 
AGCTCTGGCC TGTCCTCCGT TGCGATGGAC AGCGAAATCC CTGTTGCTTT CGGCGTTCTG 
ACGACGGAAA GCATTGAGCA GGCGATTGAG CGTGCTGGTA CGAAAGCGGG TAACAAAGGT 
GCAGAAGCTG CCCTGACCGC GCTAGAAATG ATTAATGTAT TGAAAGCGAT TAAGTAA 

 

Protein sequence

MNVIEGVVAT PDARVAIAIA RFNHFINDSL LEGAIDALKR IGQVKDENIT VVWVPGAYEL 
PLTVRALTKS AKNGGYDAVI ALGTVIRGGT AHFEFVAGEC SSGLSSVAMD SEIPVAFGVL 
TTESIEQAIE RAGTKAGNKG AEAALTALEM INVLKAIK