Gene PC1_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1020 
SymbolyajC 
ID8131949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1192232 
End bp1192564 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content49% 
IMG OID644864303 
Productpreprotein translocase subunit YajC 
Protein accessionYP_003016605 
Protein GI253687415 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTT TCATCTCCGA TGCTGTAGCT GCAACCGGCG CTCCGGCTCA GGGAAGCCCG 
TACTCTCTGG TTATTATGCT GGCCGTTTTT GGTCTGATTT TCTACTTTAT GATCCTGCGT
CCTCAGCAAA AACGCGCCAA GGAACACAAA AAGTTAATGG ATTCTATCAG CAAGGGCGAT
GAAGTATTAA CGACCGGTGG TCTGGTTGGT CGCGTGACTA AAGTGTCCGA AACTGGCTAT
ATTGCGATTG CGTTGAACGA AACCAATGAA GTGGTTATCA AACGTGATTT CGTGGCTGCC
GTGCTGCCGA AGGGCACGAT TAAGGCCCTG TAA
 
Protein sequence
MSLFISDAVA ATGAPAQGSP YSLVIMLAVF GLIFYFMILR PQQKRAKEHK KLMDSISKGD 
EVLTTGGLVG RVTKVSETGY IAIALNETNE VVIKRDFVAA VLPKGTIKAL