| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1017 |
|---|
| Symbol | |
|---|
| ID | 8131946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 1189040 |
|---|
| End bp | 1189621 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644864300 |
|---|
| Product | (Acyl-carrier-protein) phosphodiesterase |
|---|
| Protein accession | YP_003016602 |
|---|
| Protein GI | 253687412 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTC TTGCTCACCT CCATTTGGCC ACGCTGGCCG ACAGTTCTCT ATTAGGCAAT
CTGATGGCGG ATTTCGTGCG CGGCAACCCG CAGGATAGCT ATGCTGACGA GATCGTCGAC
GGCATCCGCC TGCATCGCCG CGTCGATTCG CTGACCGACA GCCTGCCGGA AGTCAAACAG
GCGCGTCAGT ATTTCAGCGA CGAATTTCGC CGCGTTGCGC CCATTACGTT GGATGTGCTG
TGGGATCACT ACCTCGCGCG CCATTGGTTA CAGTTGGTGC CGGATACGCC CCTGCAAACC
TTTATCGATG GCGCACAGTC ACAAATCGAA CCACATCTGG CGCACACGCC TGAACGTTTT
CAGAACCTGA ATCGCTATCT GTGGCCGGAG CGCTGGATGA CGCGCTATGC AGAGCTGCCG
TTTATCGCCG ATGTGTTGCA CAGAATGTCG GTACGCCGTC CTAAACTGGC GGCGCTGTCC
GGTTCTTTTC AGGATATCGA GCAACACTAT CACCAATTTG AAATACTCTT CTGGCAGTTT
TATCCACGGA TGATGCAATT AGCGAAAGCG CAACAGCTGT AA
|
|---|
| Protein sequence | MNFLAHLHLA TLADSSLLGN LMADFVRGNP QDSYADEIVD GIRLHRRVDS LTDSLPEVKQ
ARQYFSDEFR RVAPITLDVL WDHYLARHWL QLVPDTPLQT FIDGAQSQIE PHLAHTPERF
QNLNRYLWPE RWMTRYAELP FIADVLHRMS VRRPKLAALS GSFQDIEQHY HQFEILFWQF
YPRMMQLAKA QQL
|
|---|
| |