| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1007 |
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| Symbol | |
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| ID | 8131936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1177205 |
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| End bp | 1178443 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864290 |
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| Product | exonuclease subunit SbcD |
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| Protein accession | YP_003016592 |
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| Protein GI | 253687402 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTA TCCACACCGC CGATTGGCAT TTAGGACAAT ATTTTTATAC CAAAAGCCGC
GCGGCTGAAC ATCAGGCTTT TCTTCACTGG CTCATCGCTC AGGTGGAGCA GCATCAGGTC
GATGCCATTA TCGTCGCAGG CGATATTTTT GATAACGGTT CTCCCCCGAG CTATGCCCGA
GAAATGTATT ATAGCTTTGT GGTAGAACTA CAGCGTACAG GCTGCCAGCT CATCATTCTC
GGTGGAAACC ATGATTCCGT CGCGATGTTA AATGAATCCC GTGATTTGCT GGCCTGCCTG
AACACGCGCG TGATTGCCTG CGCCAGCGAC GATCCCGCCC AACAGGTGCT CCTGCTGGAA
AACCGTCAGC AGCAGCCAGG CGCCCTGCTC TGCGCCATTC CTTTTTTACG CCCGCGCGAT
GTATTGACCA GCAAAGCCGG ACAGTCCGGT GATGAAAAAC AGCTGGCGCT ACAGGAAGCC
ATTACGGCGC ACTACCAGCA GTGTTACCAA CTGGCTTGCC AAAAACGCGA TGAACTCGGC
CTGTCGCTGC CAATTATTGC CACCGGGCAC CTGACGACAA TTGGCGCCAC CGCCTCCGAA
TCCGTGCGCG ATATCTATAT TGGTTCGCTC GATGCGTTCC CTGCTCAGGC TTTTCCCCCT
GCGGATTATA TCGCGCTCGG CCATATTCAT CGCCCGCAGC GCGTGACTCA AAGTGAGCAT
ATCCGCTACA GCGGTTCGCC TATTCCGCTA AGTTTTGACG AACTCAACAG TGAGAAATCT
GTTTGTTTGG TCAGTTTTAC ACCAGACGCG TCGCCGCCAA TTCCCCCGCA GATAGATACG
CTGCCCATCC CCGTCACCCA GCCGATGCAG TTGATTAAGG GCAGTCTGAG TGACATTGAA
CGACAGCTGT CCGCGTTCCA GCACTATCAG GGTGACAAGC CCGTGTGGCT GGATATCGAA
ATCAGCACAC AGGATTATCT TAGCGACATG CAGAAGCGCA TTCAGGCAAT GACCGAGAAC
CTGCCCGTTG AGGTGCTTCT GCTACGCCGC ACGCGTGAGC AACGTTTACA GACTATGACC
CGGCAAGATA AAGAAACGCT GAACGAGCTC AGCGTGCATG ACGTTTTTGA ACGTCGTCTG
GCAACGGAGA CAGACATGGA AGAAGGCCGC CAGCAGCGGG TTCGCACCCT GTTTAATCAG
GTTATTGATG AACTGGAAAA TAGCGAGACT GCCAAATGA
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| Protein sequence | MRIIHTADWH LGQYFYTKSR AAEHQAFLHW LIAQVEQHQV DAIIVAGDIF DNGSPPSYAR
EMYYSFVVEL QRTGCQLIIL GGNHDSVAML NESRDLLACL NTRVIACASD DPAQQVLLLE
NRQQQPGALL CAIPFLRPRD VLTSKAGQSG DEKQLALQEA ITAHYQQCYQ LACQKRDELG
LSLPIIATGH LTTIGATASE SVRDIYIGSL DAFPAQAFPP ADYIALGHIH RPQRVTQSEH
IRYSGSPIPL SFDELNSEKS VCLVSFTPDA SPPIPPQIDT LPIPVTQPMQ LIKGSLSDIE
RQLSAFQHYQ GDKPVWLDIE ISTQDYLSDM QKRIQAMTEN LPVEVLLLRR TREQRLQTMT
RQDKETLNEL SVHDVFERRL ATETDMEEGR QQRVRTLFNQ VIDELENSET AK
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