| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0981 |
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| Symbol | |
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| ID | 8131910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1130042 |
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| End bp | 1130749 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864265 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003016567 |
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| Protein GI | 253687377 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.743524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAA TTGAATTGTT TACACCGGAA TACGACATTC TGCTCGCCGC GCGCAACATC
GCTAACCAGC AGGAAAGACC TGCTGAAGTT TATCGCGACA CGCTGCTGGC GTTAACCGAC
CACTACCAGC GGCTGGTACG AGAATCGCAC CGCCTGATTT CACGCAGCGA TCGCGCAGAG
AAGGAGCTGA ACCGCTTGAA CGCCCAGCTC AATCAACTGG CGGTCGAACT GGAATACAAG
GCCAGCCACG ATCCGCTGAC CAGCGTGTAT AACCGTGGCG CGATTATTGA ACGCATCAAC
CACGCGCTCG AACGCAATCA GGCAGCGCTC ATCGTGCTGG ATATCGATCA CTTCAAACTG
GTGAACGATA CCTACGGCCA CCCTACTGGC GACGCCGTCA TTTGCGATCT GGTATCGCGC
GTGCAGAACG TGCTGAATAC CACAAGCAGC ATTGGCCGCG TTGGCGGTGA AGAGTTCACC
ATTCTGCTGG AAGGACATAC GCTCATGCAG GCCGTCTCGC TCGCCAGCCG CCTTCATCAG
GATCTCAACA GAATGCCGCT CAGCGTACTG CCGCAACAGC GCGTTACCGC CAGCTTTGGT
GTTAGTTGGG CACCACAAAA AACCCGTTTC GATGCGCTCT ATAGCGCAGC GGATGCCGCA
CTCTATCAGG CCAAGGAAAA AGGCAGAAAT AGAGTGGAAT TTCAGTAA
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| Protein sequence | MSTIELFTPE YDILLAARNI ANQQERPAEV YRDTLLALTD HYQRLVRESH RLISRSDRAE
KELNRLNAQL NQLAVELEYK ASHDPLTSVY NRGAIIERIN HALERNQAAL IVLDIDHFKL
VNDTYGHPTG DAVICDLVSR VQNVLNTTSS IGRVGGEEFT ILLEGHTLMQ AVSLASRLHQ
DLNRMPLSVL PQQRVTASFG VSWAPQKTRF DALYSAADAA LYQAKEKGRN RVEFQ
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