| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0980 |
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| Symbol | |
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| ID | 8131909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1129068 |
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| End bp | 1129961 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864264 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003016566 |
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| Protein GI | 253687376 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.63083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTCG ATTTAACCGA TCTCCGGCTA TTTCTCAATA TTCAGAAAGC AGGCAGCATT
ACCGGTGGCG CAGGAGCGTC CAGCCTGACC GTTCAGGCCG CCAGCGAACG TATCCGCGGT
ATGGAAGAGG AACTTGGCGT ACCGCTGCTG CTGCGGTCAA AGGCTGGCGT TTCACTCACT
GACGCGGGAT TTTCACTCGC GCACCATGCC CACATCATCC TGCGTCAGGT AGAACATATG
CGCAGTGAAT TACACCAATA CAGTAAAGGG CTGCGCGGCC ATATTCCGCT GCTGTGCAAC
TCTGCGGCGC TGAATGAATA TTTACCCGCC CTGCTGGGTC GCTATCTGGT GGTCTGTCCG
CAGATATCCG TAACGGTGAA TGAAAAACTC AGCCGTGACA TTGTTAATGC AATCCGCAAT
CAAACCGCCG ATCTCGGCAT TGTGGCTGAT TCCGTACCGC TCGACGGGCT GGAAACACGC
CCGTTCCGTC AGGACGAACT GGTCGCGGTG GTTCCTCGCG CCAGCCTCTG GTCTGACGCA
TCGCAGCTTA CCTTTTCCGA TATTGCCGAC GCCGAATTTA TCGGGCTTAG CGAAGGGGCG
GCGTTACAGG AGCACATCGA CGAGCACGCC AAAAGGCTGG GGAAACGTCT GAATTACCGC
GTGCGCCTTG CCAGTTTCGA CGCTGTTACT CAGGTGATTC ACAGCGGTAT CGGTATTGGC
ATTCTTCCGA GACATGCCAC GCAGCGCATG ATGGAGCGGC TGGCTATCCG CACGATCCCG
CTCGCAGACG ACTGGGCAAC GCGTCATCTG GTTGTCTGCG CCCGTCAGTT TTCCGCGCTG
CCCGGTTATG TTCAGGATTT CGTGGCGTTT ATTACAGCCG AGAACGCCGC TTAA
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| Protein sequence | MRFDLTDLRL FLNIQKAGSI TGGAGASSLT VQAASERIRG MEEELGVPLL LRSKAGVSLT
DAGFSLAHHA HIILRQVEHM RSELHQYSKG LRGHIPLLCN SAALNEYLPA LLGRYLVVCP
QISVTVNEKL SRDIVNAIRN QTADLGIVAD SVPLDGLETR PFRQDELVAV VPRASLWSDA
SQLTFSDIAD AEFIGLSEGA ALQEHIDEHA KRLGKRLNYR VRLASFDAVT QVIHSGIGIG
ILPRHATQRM MERLAIRTIP LADDWATRHL VVCARQFSAL PGYVQDFVAF ITAENAA
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