| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0963 |
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| Symbol | |
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| ID | 8131892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1113392 |
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| End bp | 1114090 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864247 |
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| Product | lipoprotein involved with copper homeostasis and adhesion |
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| Protein accession | YP_003016549 |
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| Protein GI | 253687359 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.316289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA AACTGGCTAT CGGTGTGCTG TTGATTGCAG GGATTTCTGG GTTGATCGGG
TGTCATACCC GATCACAAGT TCAGGAAGAG CCCCTTAAAC CAATGGCGCA AAGTTATCGT
GGTGTTTTAC CCTGTGCGGA CTGCGGGGGG ATTGATACGT CACTGTTTTT GGAAAAAGAT
GGCACGTTTG TTCTGCGCGA GCAATACCAA ACAACGCGAG AGGGTAACAA CACGTTTGCC
TCCTATGGGC AGTGGCGCCG TACTGCGGAT AAGCTGGTGT TGACGGATAG CGCGGGTGAA
AAACGTTACT TCCGCCCGGT CGACAACTCA CTTGAAATGC TGGATCAGCA AGGTTTGCCC
ATTAACTCAT CCCTTCCTCG TCAACTGACG GCAACCGAGC AGCCTTTGCC AAACACGCCG
ATGGTAATGA AGGGAATGTA CCGCTATATG GCGGACGTCG CGACCTTCTC TGATTGTGCG
ACAGGAAAGA CCTTTGTGAT GGATGATAGC GCGGAGTTGG AGAGACAATA TTTTCGCGTG
AGAGATAAAG CCGCTGAACC GGTATTACTT GTTCTGACTG CGCACTTTGC CGTGATTCCG
TCGATGGAAG AAGGGCAGAT GGTGAAGGCT GTGGTCCCTA ACGGCAGCGA TAAAGCACGT
ATGAGAGCAC GAGCAAACTG CGATACACAA ATAGACTAA
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| Protein sequence | MMKKLAIGVL LIAGISGLIG CHTRSQVQEE PLKPMAQSYR GVLPCADCGG IDTSLFLEKD
GTFVLREQYQ TTREGNNTFA SYGQWRRTAD KLVLTDSAGE KRYFRPVDNS LEMLDQQGLP
INSSLPRQLT ATEQPLPNTP MVMKGMYRYM ADVATFSDCA TGKTFVMDDS AELERQYFRV
RDKAAEPVLL VLTAHFAVIP SMEEGQMVKA VVPNGSDKAR MRARANCDTQ ID
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