Gene PC1_0962 details

Gene Information

• Locus tag: PC1_0962
• ID: 8131891
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1112767
• End bp: 1113321
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644864246
• Product: YaeQ family protein
• Protein accession: YP_003016548
• Protein GI: 253687358
• COG category: [S] Function unknown
• COG ID: [COG4681] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.505382
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTAA AAGCAACGGT TTACAAAGCA GCAATCAATA TTGCCGATAT GGATCGGAAT 
TTTTTTCACG ACGCGAACCT GACGATAGCG CAGCATCCGT CTGAAACGGA GCAGCGCATG 
ATGCTGCGGC TTTTAGCGTG GATTTGCCAT GCTGATGAAA ACCTCCGCTT TACCAAAGGG 
CTCAGTGCCG ATGACGAGCC GGAAATCTGG CGACGCAACG ATACGATGGA ACTGGAATTG 
TGGATTGAGC TAGGTTTGCC GGATGAAAAG CGGTTGAAGA AAGCCTGCAA CCAGTCCCGC 
GCCGTCGTGC TATACGCTTA CAGCGAGCGC GCGGCACAGG TCTGGTGGAG TGCGATATCG 
GGTAAGGTTT CCGGGTACAA GAATCTGGCT ATTCGCTTTT TGGATGATAA TCAACTGGCT 
CAGCTTGCCG GACTGGCCGC GCGCACGATG GCATTGCAGG CAACGATACA GGAAGGAACG 
ATCTGGTTGT CTGACGATAA GAATAGTCTG GAAATAGCAT TTTCTGAGTG GAAAATTCCT 
CAGACTCAGG GATGA 

 

Protein sequence

MALKATVYKA AINIADMDRN FFHDANLTIA QHPSETEQRM MLRLLAWICH ADENLRFTKG 
LSADDEPEIW RRNDTMELEL WIELGLPDEK RLKKACNQSR AVVLYAYSER AAQVWWSAIS 
GKVSGYKNLA IRFLDDNQLA QLAGLAARTM ALQATIQEGT IWLSDDKNSL EIAFSEWKIP 
QTQG