| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0948 |
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| Symbol | |
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| ID | 8131877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1096955 |
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| End bp | 1098310 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864232 |
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| Product | zinc metallopeptidase RseP |
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| Protein accession | YP_003016534 |
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| Protein GI | 253687344 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000214354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGTT TTCTCTGGAA TCTTGCCGCG TTTATCATCG CACTGGGTGT GCTGGTCACC
GTCCATGAGT TTGGGCATTT CTGGGTGGCT CGCCGCTGTG GTGTGAAGGT CGAACGCTTC
TCCGTTGGCT TCGGTCGCGC AATATGGCGT CGTCGCGATC GTACCGGTAC CGAATTCGTG
ATTGCGCTGA TTCCGCTTGG TGGCTACGTC AAGATGTTGG ATGAGCGCGT CGACACGGTT
GCGCCAGAAT TCCGCCACCA ATCATTTAAT AGTAAAACGG TCTGGCAGCG TGCGGCGATC
GTCAGCGCTG GTCCGATTGC CAATTTCCTG TTTGCCATTG TGGCGTATTG GCTGGTGTTT
ATTCTCGGCG TGCCGGGTGT ACGCCCGGTA GTGGGTGAAA TACTGCCCAA CTCCATCGCG
GCGCAAGCGG AAATGTCGGC GGGAATGGAA CTAAAGTCAG TAGATGGTAT CGAAACGCCT
GATTGGGATA CTGCGCGTCT GGCGCTGATC GGTAAAATCG GCGATAGCGA GGTTGTAATC
GGAAGCGCAC CGTTAGGTTC TGACCGTGTC GTTCAAAAAA CGCTGGATTT ACGCGATTGG
CAGTTCGAGC CTGATAAGCA AGATCCGGCC GCCTCGCTCG GGATTATTCC GCGCGGTCCG
CAAATCGAGC CAGTACTGCA TCAGGTGCAG GCAGGGTCGG CGGCGGAAAA AGCAGGTTTG
CAAGTCGGAG ATAGGATCGT TAAAGTCGAC GGGCAGGTAC TAGCGCAATG GCGGGATTTC
GTCATCGCCG TGCGTGATAA CCCCGGACAA TCTATTGCTC TGGAGGTGGA GCGAAACGGT
GCAGCAGTAC CGTTGACGTT AACGCCGGAC AGCAAATCTG TGGGGAGTGG CAGAGTTGAA
GGGCTGGCGG GCGTTATGCC AAGTGTGACG CCACTGCCTG AAGAATACAG AACTGTGCGC
CAGTATGGGC CGTTTAGCGC AATCTACCAG GCAACAGATA AAACCTGGCA ACTGATGAAA
TTGACCGTCA GTATGTTAGG GAAACTGGTT ATGGGTGATG TTAAGCTAAA CAACCTGAGT
GGTCCCATTT CGATTGCTCA GGGCGCAGGA ATGTCAGCAG ATTATGGATT GATTTATTAC
CTGATGTTTT TGGCCTTAAT CAGCGTCAAT TTGGGGATCA TCAATCTGTT CCCTCTGCCG
GTATTGGATG GTGGACACCT GCTCTTTCTT GCGGTTGAAA AGCTGAAGGG CAGGCCGGTT
TCTGAGCGTG TGCAGGACGT TAGCTATCGC ATTGGTACAG TGTTGCTGAT GTTGTTAATG
GGACTCGCAC TTTTCAATGA TTTCTCTCGT CTCTAG
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| Protein sequence | MLSFLWNLAA FIIALGVLVT VHEFGHFWVA RRCGVKVERF SVGFGRAIWR RRDRTGTEFV
IALIPLGGYV KMLDERVDTV APEFRHQSFN SKTVWQRAAI VSAGPIANFL FAIVAYWLVF
ILGVPGVRPV VGEILPNSIA AQAEMSAGME LKSVDGIETP DWDTARLALI GKIGDSEVVI
GSAPLGSDRV VQKTLDLRDW QFEPDKQDPA ASLGIIPRGP QIEPVLHQVQ AGSAAEKAGL
QVGDRIVKVD GQVLAQWRDF VIAVRDNPGQ SIALEVERNG AAVPLTLTPD SKSVGSGRVE
GLAGVMPSVT PLPEEYRTVR QYGPFSAIYQ ATDKTWQLMK LTVSMLGKLV MGDVKLNNLS
GPISIAQGAG MSADYGLIYY LMFLALISVN LGIINLFPLP VLDGGHLLFL AVEKLKGRPV
SERVQDVSYR IGTVLLMLLM GLALFNDFSR L
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