| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0943 |
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| Symbol | pyrH |
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| ID | 8131872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1092261 |
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| End bp | 1092986 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864227 |
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| Product | uridylate kinase |
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| Protein accession | YP_003016529 |
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| Protein GI | 253687339 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0528] Uridylate kinase |
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| TIGRFAM ID | [TIGR02075] uridylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00384678 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACCA ATGCAAAACC CGTCTATCAA CGAATCCTGC TGAAGCTCAG TGGCGAAGCT
TTACAGGGAA CTGAAGGTTT TGGTATCGAT GCGAGCATTC TGGATCGCAT GGCTCAGGAA
GTGAAAGAAC TGGTTGAGTT AGGCATTCAG GTCGGTGTGG TTATCGGTGG TGGTAACCTG
TTTCGTGGCG CGGGTCTGGC TAAAGCGGGT ATGAACCGCG TTGTGGGCGA CCACATGGGA
ATGCTGGCGA CCGTCATGAA TGGTCTGGCA ATGCGTGATG CGTTGCACCG TGCCTATGTG
AACGCTCGCC TGATGTCTGC GATTCCCCTG AATGGCGTCT GTGATAACTA CAGTTGGGCG
GAAGCGATCA GCCTGCTGCG TAATAATCGC GTGGTGATTT TCTCCGCCGG AACAGGTAAC
CCTTTCTTTA CCACGGATTC TGCAGCTTGC CTGCGCGGCA TCGAGATTGA AGCGGATGTC
GTATTGAAAG CGACCAAGGT CGATGGCGTC TATTCTGCCG ATCCGGTAAA AGATCCTTCA
GCAACGTTAT ACGATTCACT GACCTATCAG GAAGTGTTAG AACGTGAACT GAAAGTGATG
GATCTTGCTG CGTTCACGCT GGCGCGTGAC CATAATTTGC CGATCCGTGT TTTCAACATG
AACAAACCGG GCGCACTGCG TCGTGTTGTC ATGGGTGAAA AAGAAGGGAC GTTAATCAGC
CAGTAA
|
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| Protein sequence | MATNAKPVYQ RILLKLSGEA LQGTEGFGID ASILDRMAQE VKELVELGIQ VGVVIGGGNL
FRGAGLAKAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL NGVCDNYSWA
EAISLLRNNR VVIFSAGTGN PFFTTDSAAC LRGIEIEADV VLKATKVDGV YSADPVKDPS
ATLYDSLTYQ EVLERELKVM DLAAFTLARD HNLPIRVFNM NKPGALRRVV MGEKEGTLIS
Q
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