Gene PC1_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0941 
SymbolrpsB 
ID8131870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1090393 
End bp1091118 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content50% 
IMG OID644864225 
Product30S ribosomal protein S2 
Protein accessionYP_003016527 
Protein GI253687337 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0031234 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTG TTTCCATGCG CGATATGCTC AAGGCTGGCG TACACTTTGG TCACCAGACC 
CGTTACTGGA ACCCGAAAAT GAAACCATTC ATCTTCGGTG CGCGTAACAA AGTTCACATC
ATCAACCTTG AAAAAACTGT ACCAATGTTC AACGACGCTC TTGCTGAATT GAGCAAAATT
GCTTCTCGCA AAGGCAAAAT TCTGTTCGTT GGTACTAAGC GCGCAGCAAG CGAAGCGGTA
AAAGATGCAG CCAACAACTG CGATCAGTTC TTCGTGAACC ATCGTTGGTT GGGCGGTATG
CTGACTAACT GGAAAACCGT TCGTCAGTCC ATCAAACGTT TGAAAGATCT GGAAACCCAA
TCTCAAGACG GCACGTTCGA CAAGCTGACC AAAAAAGAGG CGCTGATGCG CACTCGTGAA
CTGGACAAGC TGGAAAACAG CCTGGGCGGT ATCAAAGATA TGGGCGGTCT GCCAGACGCG
CTGTTCGTTA TCGACGCCGA TCACGAGCAC ATCGCAATCA AAGAAGCTAA CAACCTGGGT
ATTCCGGTAT TCGCAGTGGT TGATACCAAC TCCGATCCAG ATGGCGTTGA CTACATCATC
CCTGGTAACG ATGACGCAAT CCGTGCAGTT AGCCTGTACC TGAGCGCTGT TGCTACTGCT
GTCCGCGAAG GCCGTTCTCA GGATCTGGCT GTGCAGGCAG AAGAAGGCTT AGTAGAAGCT
GAATAA
 
Protein sequence
MATVSMRDML KAGVHFGHQT RYWNPKMKPF IFGARNKVHI INLEKTVPMF NDALAELSKI 
ASRKGKILFV GTKRAASEAV KDAANNCDQF FVNHRWLGGM LTNWKTVRQS IKRLKDLETQ
SQDGTFDKLT KKEALMRTRE LDKLENSLGG IKDMGGLPDA LFVIDADHEH IAIKEANNLG
IPVFAVVDTN SDPDGVDYII PGNDDAIRAV SLYLSAVATA VREGRSQDLA VQAEEGLVEA
E