Gene PC1_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0936 
Symbol 
ID8131865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1084444 
End bp1084899 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content53% 
IMG OID644864220 
Productflavodoxin 
Protein accessionYP_003016522 
Protein GI253687332 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000373319 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGA TTGGTATTTT TGTTGGTACG GTCTACGGGA ATGCATTGCT GGTGGCCGAA 
GAAGCCGAAA ATATCCTCAG GGAGCGTGGC CATGAGGTTA AGGTCTTTGA AGATGCAACG
CTGGAATCCT GGCTGGACTA TCGCGAGCAG ACGGTTTTAG TTGTAACGTC GACGACGGGA
CAAGGCCAAC TACCTGATTC TATCGTTCCA CTTTACGCCG CACTGCGTGA TAAAGGCGGT
TACCAGCCTG CGCTGCGCTA TGGCGTGATC GCGTTGGGTG ACAGCAGTTA CCCGAATTTC
TGCGCGGGTG GGCATCTTTT CGATGCACTA TTGCAGGAAA TCGGTGCTAA GCGTCTGGGA
GATGTTTTGG ACATTGATGC CGTCGAACAT CCTGAACCGG AAGTGATTTC ATGCCCGTGG
GTTGAAGGAT GGGCTGACCT GGTTGATGCG CAGTAA
 
Protein sequence
MAQIGIFVGT VYGNALLVAE EAENILRERG HEVKVFEDAT LESWLDYREQ TVLVVTSTTG 
QGQLPDSIVP LYAALRDKGG YQPALRYGVI ALGDSSYPNF CAGGHLFDAL LQEIGAKRLG
DVLDIDAVEH PEPEVISCPW VEGWADLVDA Q