Gene PC1_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0929 
Symbol 
ID8131858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1077146 
End bp1078246 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content53% 
IMG OID644864213 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_003016515 
Protein GI253687325 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.088881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAG TCATTTTGTA TTGCCGCCCT GGGTTTGAGA AAGAATGTGC GGCGGAAATA 
ACGGAAAAAG CCACGCAGCA TGATGCCTAT GGTTTCGCGC GGGTAAAAGA AAACAGCGGC 
TACGTCGTAT TTGAATGCTA CCAGCATGAA GATGCTGAGC GTCTGGTGAA AACGCTGCCG 
TTTCATGAGC TGATTTTTGC CCGTCAGATG TTCGTGAGTG GTGAACTGCT GCGCGATCTG 
CCGCCGGAAG ATCGTATCAC GCCAATTGTC GGCATGTTGT CGGGAGCTAT TGAACGTGCA 
GGAGAACTGC GCGTTGAAGT TCCCGATACC AACGAAAGCA AAGAGCTGAT GAAGTTCTGC 
CGCAAATTCA CCGTGCCGCT GCGTGCGGCG TTGCGCGAAC ATAAAATTCT GTTGGGTTAT 
GAAAAAGCCG ATCGGCCGGT ACTGCATGTG CTGTTTATTG CCCCAGGCTG CTGCTATGTC 
GGTTACTCCT ATAGCAATAA TAACTCGCCG TTTTACATGG GGATCCCACG GCTTAAATTC 
CCTTCTGATG CGCCAAGTCG TTCGACATTG AAGCTGGAAG AAGCGTTTCA CGTCTTTATT 
CCTGCGGATG AGTGGGATGA GCGCTTGGGC AGCGGTATGT ACGCGGTGGA TTTAGGCGCG 
TGTCCCGGCG GCTGGACTTA CCAACTGGTT AAACGCAGCA TGATGGTTTA TGCGGTAGAC 
AATGGACCTA TGGCGCCGAG CCTGATGGAG ACTGGGCAGG TGATGCACCA TCAGGCGGAC 
GGTTTCCGCT TTGAGCCACC GCGTAATAAC GTGTACTGGC TGGTGTGCGA CATGGTGGAA 
AAACCCGCGA AAGTCACTAG CCTGATGAGT GATTGGCTGA TCAAAGGCTG GTGTCGCGAG 
GCCATTTTCA ACCTGAAACT GCCGATGAAG AAGCGTTATG AAGAGGTGTC GCATAATCTG 
GCGGTGCTGC AAGAACGCCT GAGTGAAAAT GGCATTAATG CCGAAGTGCA TGCCAAGCAC 
CTGTACCATG ACCGTGAAGA AATCACCGTG CATGTCCGGC GTTTCTGGAG TGCAGTGCCC 
GGCCGTCGCG ACGAGCGGTA A
 
Protein sequence
MNRVILYCRP GFEKECAAEI TEKATQHDAY GFARVKENSG YVVFECYQHE DAERLVKTLP 
FHELIFARQM FVSGELLRDL PPEDRITPIV GMLSGAIERA GELRVEVPDT NESKELMKFC 
RKFTVPLRAA LREHKILLGY EKADRPVLHV LFIAPGCCYV GYSYSNNNSP FYMGIPRLKF 
PSDAPSRSTL KLEEAFHVFI PADEWDERLG SGMYAVDLGA CPGGWTYQLV KRSMMVYAVD 
NGPMAPSLME TGQVMHHQAD GFRFEPPRNN VYWLVCDMVE KPAKVTSLMS DWLIKGWCRE 
AIFNLKLPMK KRYEEVSHNL AVLQERLSEN GINAEVHAKH LYHDREEITV HVRRFWSAVP 
GRRDER