| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0913 |
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| Symbol | |
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| ID | 8131839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1054097 |
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| End bp | 1057057 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864194 |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_003016499 |
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| Protein GI | 253687309 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAC AGTGGGTCTG GATTACCGGG TGGTTTCTTT TATTCACATT CTGGCTTCCG
GCGAGTTGGG CAGAAACAGG CTGGCAGCCG CTGGCGCAGA CCATTCGAAA AAGCGAAAAA
GATCCGCGGC AATATCAGGC GATCAAGCTG GATAACGGAA TGACCGTTCT GCTGGTTTCC
GATCCGCAGG CACCCAAATC CTTGGCATCA CTGGCGTTGC CTATTGGTTC GCTGAACGAT
CCTGATAACC AACTGGGGCT AGCGCACTAC CTTGAACACA TGGTGCTGAT GGGATCGAAA
CGTTACCCTG AGCCGGAAGC CCTGTCCGAA TTTTTGAAAA AGCATGGCGG CAGCCACAAC
GCCAGCACGG CGTCTTACCG CACGGCGTTT TATCTGGAAG TGGAAAATGA TGCGCTGCGG
CCAGCGGTCG ATCGCATGGC CGATGCGATT GCGGAACCGC TGCTCGATCC GGTGAATGCC
GATCGTGAGC GTAACGCGGT CAATGCAGAA TTGACGATGG CACGTTCGCG TGACGGTCAT
CGCATGGCGC AGGTAGGCGC AGAGACGCTG AATCCGGCGC ACCCGAGCGC GCGTTTTTCG
GGGGGCAATC TTGAGACCCT GAGCGATAAA CCCGGTAGCA AACTGCATGA TGAACTGGTG
AAGTTTTATC AGAAATACTA CTCGGCCAAC CTGATGAAAG GGGTGATTTA CAGCAATCAA
CCTCTGCCGG AACTGGCGAA ACTGGCGGCC GACACATTCG GGCGTATTGC CAATCACAAC
GCCAGCGTTC CCGCGGTTAC CGTTCCTGTC ACGACGGAGA AGCAGCGCGG CGTAATGATT
CACTATGTTC CCGCACAGCC AAGAAAACAG CTGCGTATTG AGTTTCGCGT CAGCGATATT
AGCCAGGAAT TTCGTAGTAA GACGGATACC TACATTAGCT ATCTGATCGG TAACCGCAGC
CAGAATACGC TTTCTGACTG GTTACAAAAG GAAGGTCTGG TTGAGTCTAT CGGTGCAGGT
TCTTCACCGA TCATTGACCG TAACGGCGGC ATGTTTGCAA TTTCAGCCTC GCTGACCGAT
AAAGGTCTGG CACAGCGTGA CGAGGTGATT GCCGCCATCT TCCGTTACCT GCAACAAATC
CGTACCGAGG GGATTCAACA GCGTTATTTT GATGAAATCG CGCATGTTCT GGATCTGGAT
TTCCGCTATC CGTCCATCAG CCGGGATATG GACTATATCG AATGGCTGGT GGATACCATG
TTGAGTGTGC CGGTCGAACA TACGCTGGAT GCGCAGTATG TTGCGGATCG TTATGATCCA
AAGGCTATCG CCGCACGTCT GGACGAAATG ACGCCGCAGA ATGCGCGCGT CTGGGTCATC
AGTCCGAATG AACCGCATAA TAAAGTGGCC TATTTTGTCG ATGCGCCGTA CGAGATGGAT
AAAATTCCAT CGGCCACATT CGCAAAATGG AAAACGCTGG GACAGAAAAT GTCGCTGTCG
TTGCCGACGA TCAATCCGTA TATCCCCGAT GATTTTTCCC TGATCAAAGC CGATAAGGCG
ATGACTAAGC CGACGCTCCT GCTGAATCAG CCGGGGTTAC GCGTGTTGTA TATGCCAAGC
CACTACTTCG CCGATGAACC GAAAGCGGAA ATTACGCTGT TTCTGCGGAA TCAGGAAGCG
CGCAGTACCG CCCGTAATCA GGTGCTGTTT GCGTTAAATG ATTATTTGGC GGGGCTGGCA
TTGGATGAGC TCAGCTATCA GGCCTCGGTT GGTGGCATCA GTTTCTCCAC CCGCAGTAAT
GATGGTCTGG TGATTAACGC CAATGGCTAT ACCCAGCATT TACCACGGTT GTTACTGACG
TTGGCGGATG GCTATGCCTC CTTTACGTCG ACGGAAGAGC AGTTAGAACA GGCAAAATCC
TGGTATTTGC AGCAGTTGGA TGCGGTAGAG AAATCAAAAG CGTTTGAACA GGCATTACAG
CCGATTCAGG CTGTGTCGCA ACTGCCTTAC TTCGAGCGTG GTGAACGCCG TAAGCTGCTG
AAGGATATCC GTTTACAGGA CGTGGTTAAC TACCGTAAAG ATCTGCTGCA AAAAGCCACG
CCGGAAATGC TGGTCGTCGG CAATCTGGCT CCAGAGCGAG TCACCGAACT GGCAAATACG
CTGAAAGCGC ATTTGAAGGC CGATGGTGAA AATCTGTCGC GCAGCGATGA TGTCAAAGTC
AGTAAGACAC AGCTTGCTAA TCTACAGCGT CCTGGCAGCA GCACGGATTC TGCGTTAGCG
GCGGTGTATG TACCGACGGG TTACTCGGAA ACGCAGAGTA TGGCATATAG CTCCGTGCTG
GGGCAGATCG TCCAGCCTTG GTTCTATAGC CAATTGAGAA CGGAAGAGCA ACTGGGCTAT
GCCGTGTTTG CCTTCCCGAC GTCTGTTGGC AGACAGATGG GTATCGGCTT CCTGCTGCAA
AGTAATAGCA AGCAGCCAGC TTATCTCTAT CAGCGCTATG AAGATTTTTA CCTGAAAGCG
CAAAAACGGC TGCGTGAAAT GAGTGAAGAA GAATTTGCGC AGTATAAGCA GGGCGTGATG
AATGAACTGA ATCAGCGCCC GCAAACATTG GGCGAAGAAG CTGGCCGACT GCGTAAAGAT
CTGGATCAGG AAAACTTTGC TTTTGACTCG CGTGAGAAAC TGCTCGAACA AATCAAACCG
CTGACGGTGA CGCAAGTGGC TGATTTCTTC CAGAAGGCGC TGAAGCCTGA AGGGCTCGCC
GTGCTGTCAC AGGTTTCCGG TAGCCATCAT GGTAAAGCTG ACTATGCTGC GCCGAAGGGA
TGGCATACCT ACGCGGATGC ATCTTCGTTG CAGAAAACGT TACCGCATGA GAAAGCGCCT
GCGATGATCC CGGCCCCCGC AGCACTGCCG ACGGTAGAAG CTGCGGCACC GGAAGCTGTC
GGTAAGGTTT CAGCAGAATG A
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| Protein sequence | MRKQWVWITG WFLLFTFWLP ASWAETGWQP LAQTIRKSEK DPRQYQAIKL DNGMTVLLVS
DPQAPKSLAS LALPIGSLND PDNQLGLAHY LEHMVLMGSK RYPEPEALSE FLKKHGGSHN
ASTASYRTAF YLEVENDALR PAVDRMADAI AEPLLDPVNA DRERNAVNAE LTMARSRDGH
RMAQVGAETL NPAHPSARFS GGNLETLSDK PGSKLHDELV KFYQKYYSAN LMKGVIYSNQ
PLPELAKLAA DTFGRIANHN ASVPAVTVPV TTEKQRGVMI HYVPAQPRKQ LRIEFRVSDI
SQEFRSKTDT YISYLIGNRS QNTLSDWLQK EGLVESIGAG SSPIIDRNGG MFAISASLTD
KGLAQRDEVI AAIFRYLQQI RTEGIQQRYF DEIAHVLDLD FRYPSISRDM DYIEWLVDTM
LSVPVEHTLD AQYVADRYDP KAIAARLDEM TPQNARVWVI SPNEPHNKVA YFVDAPYEMD
KIPSATFAKW KTLGQKMSLS LPTINPYIPD DFSLIKADKA MTKPTLLLNQ PGLRVLYMPS
HYFADEPKAE ITLFLRNQEA RSTARNQVLF ALNDYLAGLA LDELSYQASV GGISFSTRSN
DGLVINANGY TQHLPRLLLT LADGYASFTS TEEQLEQAKS WYLQQLDAVE KSKAFEQALQ
PIQAVSQLPY FERGERRKLL KDIRLQDVVN YRKDLLQKAT PEMLVVGNLA PERVTELANT
LKAHLKADGE NLSRSDDVKV SKTQLANLQR PGSSTDSALA AVYVPTGYSE TQSMAYSSVL
GQIVQPWFYS QLRTEEQLGY AVFAFPTSVG RQMGIGFLLQ SNSKQPAYLY QRYEDFYLKA
QKRLREMSEE EFAQYKQGVM NELNQRPQTL GEEAGRLRKD LDQENFAFDS REKLLEQIKP
LTVTQVADFF QKALKPEGLA VLSQVSGSHH GKADYAAPKG WHTYADASSL QKTLPHEKAP
AMIPAPAALP TVEAAAPEAV GKVSAE
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