Gene PC1_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0911 
Symbol 
ID8131837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1050152 
End bp1050541 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content53% 
IMG OID644864192 
Productputative prepilin peptidase dependent protein c precursor 
Protein accessionYP_003016497 
Protein GI253687307 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGA ATAGCGCAGT GAATAAGGGG CCAGTGAGTC ATCAATCCGG TTTTAGCCTG 
CCGGAAACGC TGGTGGCGGC GCTGCTGTTT GCCGTGTCGC TGATGGGATT ACTGCAATAT 
CACCAGATTT TACAGCAGTC ATTTCAGCAC CAGTGGCAGC AGCGTCAGGC GTGGCGGTTC 
GCTATGCAGC AACTGGACGC TTATGAAGCG GGTGTGCCGT ATGATCCGTT CGCGCTTGGT 
CATGAAGCAT CTCTTAGCAA AAACTGGCAG TTTAGTGTGT CAGAGCAGTT ACAGAGCCCA 
GAATGCCGTC AGGTAACGGC AAGAGTCATG ACGCCACGTC GCTATCAGGC TACACTAAAC 
CGTTGGTTTT GCCGAACGCC GCCTGTTTAG
 
Protein sequence
MQQNSAVNKG PVSHQSGFSL PETLVAALLF AVSLMGLLQY HQILQQSFQH QWQQRQAWRF 
AMQQLDAYEA GVPYDPFALG HEASLSKNWQ FSVSEQLQSP ECRQVTARVM TPRRYQATLN 
RWFCRTPPV