| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0909 |
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| Symbol | |
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| ID | 8131835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1049102 |
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| End bp | 1049713 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864190 |
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| Product | hypothetical protein |
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| Protein accession | YP_003016495 |
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| Protein GI | 253687305 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGATAG CCATGACGTT GAGACAACCA AGGCTAAGGT GTAAGCAGCG CGGCTTCACT
TTGCCGGAAA TCCTGTTAGC GCTGAGTTTA GGTAGTTTGA TTATGCTGTC GGCGGCACAG
CTCTACCCTC TGTTGCGCAG CCAAAGTCAG GACAGCGCAC AGCTTTTCCG GCTTGAACAA
CTGTTCAGTC AGGTAGCGAT GGGGATTGAG AAAGACATCC GTCGGGCCGG TTTTTGTGCG
GGAAGCTGTC AGGGCAAGGC GATTAGCATG GGGAATTATC CAGGAGAAGC GGAAAACAGC
TGTCTGAATG TTTCTTACGA TCTCAACCGG AATGGGGTGT GGGATGGTGG GGAGCAGCAG
GATGCGGAAT CTTTTGGCTA TCGCCTGCGC GGTCGATCGT TGGAAATTCA GAGCGGGGCG
CACAATTGTC AGGGCGATCG ATGGGAAAAG TTGTTTGATC CGCAGGAAGT CGTACTTACG
CTGTTCCGGT TACAGCGTTT GGCTACGCAA AATGGTGTGG CGCTGTATGA ATTGCAACTG
GCGGGATACT GGGCGAAACG CCCTGCGGTT AAGCAACATA TTGTCCGCCT GATATTGGGA
CGTAACCAAT GA
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| Protein sequence | MLIAMTLRQP RLRCKQRGFT LPEILLALSL GSLIMLSAAQ LYPLLRSQSQ DSAQLFRLEQ
LFSQVAMGIE KDIRRAGFCA GSCQGKAISM GNYPGEAENS CLNVSYDLNR NGVWDGGEQQ
DAESFGYRLR GRSLEIQSGA HNCQGDRWEK LFDPQEVVLT LFRLQRLATQ NGVALYELQL
AGYWAKRPAV KQHIVRLILG RNQ
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