Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0894 |
Symbol | |
ID | 8131820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1035512 |
End bp | 1036339 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644864175 |
Product | phosphonate ABC transporter, ATPase subunit |
Protein accession | YP_003016480 |
Protein GI | 253687290 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02315] phosphonate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.658454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAGG TATTATTGAA ATCCGGCCTC GAATTTAAAA CGCAGTTACA GCCCGTTCGG TCGCAAAAGG TGTTGTCCGT TCGGGGCGTA GGGAAAGCGT GGTCTCCACA ACATCGAGTG CTAGACGACA TTAACTTCGA TCTGCACACG GGAGAACTGG TTGCTGTTAT TGGCCGTTCC GGAGCGGGAA AATCGACGCT GCTGCATCTG TTAAACGGCA CGATTCCCGC CTCCGGCGGT GAAATTATCA ACCACAGCGG TGAGCAGCCG CAGGATATTA TCAAGCTCAG CCCGCGCCAG ATACGCCAAT GGCGCGCCCA TTGCGGCATG ATCTTTCAGG ATTTCTGTCT GGTTCCGCGG TTGGATGTTC TCACTAACGT CTTGTTAGGC CGCCTTAGCC AAACCTCTAC GCTCAAGTCA CTGTTTCGTG TGTTTTCCGA CGAGGACCGC GCTCGCGCCA TCGAACTGTT GCAATGGGTA AACATGCTAC CGCAGGCGCT ACAGCGTGCG GAAAATCTCT CTGGCGGCCA GATGCAACGC GTCGCCATCT GTCGGGCTCT CATGCAGCAG CCCAGAATTC TGCTGGCCGA TGAACCGGTC GCGTCGCTCG ATCCCAAGAA TACCCGCCGC ATTATGGATG TCTTGCGGGA AGTGAGCCAG CAGGGGATCA GCGTCATGGT TAACCTGCAC TCGGTGGATC TGGTGAAGCG CTACTGTACG CGCGTCATCG GGATCGCTCA GGGGTGCATT GTTTTTGACG GTCACCCAAC GCGATTGGAT GAGCCGCTGC TTCATACGCT GTATGGCGAT GAACTGAACG CGCATTAA
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Protein sequence | MAQVLLKSGL EFKTQLQPVR SQKVLSVRGV GKAWSPQHRV LDDINFDLHT GELVAVIGRS GAGKSTLLHL LNGTIPASGG EIINHSGEQP QDIIKLSPRQ IRQWRAHCGM IFQDFCLVPR LDVLTNVLLG RLSQTSTLKS LFRVFSDEDR ARAIELLQWV NMLPQALQRA ENLSGGQMQR VAICRALMQQ PRILLADEPV ASLDPKNTRR IMDVLREVSQ QGISVMVNLH SVDLVKRYCT RVIGIAQGCI VFDGHPTRLD EPLLHTLYGD ELNAH
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