Gene PC1_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0883 
SymboltrmB 
ID8131809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1026807 
End bp1027526 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content54% 
IMG OID644864164 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_003016469 
Protein GI253687279 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAACA ACGTCATTTC ACCGGAATTT GATGAAAATG GACGCCCGAT GCGTCGTATC 
CGCAGTTTTG TCCGCCGTCA GGGACGTTTG ACCAACGGAC AACAGCTGGC GCTGGATAAC
TACTGGCCGG TGATGGGCGT GGAATATCAG ACCGAACAGG TAGATTTTAA CGCGCTATTT
GGTCGTGACG CGCCAGTGGT GCTGGAAATT GGTTTTGGGA TGGGCGCCTC GCTGGTGACG
ATGGCGGCAC AGCATCCCGA ACAGAATTTC CTCGGTATTG AAGTTCACCT GCCGGGCGTG
GGGGCGTGCC TCGCTTCCGC ACAGGAGGCG GGAATCAGCA ATCTGCGCGT GATGTGTCAC
GATGCGATCG AAGTGCTGAT GAAGATGATC CCCGATGGTT CACTGTCCAT GGTTCAACTC
TTCTTCCCCG ATCCGTGGCA CAAAGCCCGT CATAATAAAC GTCGCATCGT TCAGGTGCCT
TTCGTCGAAC TGGTACAGAG TAAGCTGAAA GTCGGCGGTG TGTTCCATAT GGCAACAGAT
TGGGAACCTT ATGCGCAACA TATGCTCGAA GTGATGACGT CTGTCGCCGG GTACCGCAAC
CTTTCCGATA AGAATGACTA CGTTGAGCGG CCGGATTCTC GACCGCTGAC GAAATTTGAA
GCGCGCGGCC AGCGTTTGGG GCATGGCGTA TGGGATCTGA TGTTTGAGAG GATAAAATAA
 
Protein sequence
MINNVISPEF DENGRPMRRI RSFVRRQGRL TNGQQLALDN YWPVMGVEYQ TEQVDFNALF 
GRDAPVVLEI GFGMGASLVT MAAQHPEQNF LGIEVHLPGV GACLASAQEA GISNLRVMCH
DAIEVLMKMI PDGSLSMVQL FFPDPWHKAR HNKRRIVQVP FVELVQSKLK VGGVFHMATD
WEPYAQHMLE VMTSVAGYRN LSDKNDYVER PDSRPLTKFE ARGQRLGHGV WDLMFERIK