Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0883 |
Symbol | trmB |
ID | 8131809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1026807 |
End bp | 1027526 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864164 |
Product | tRNA (guanine-N(7)-)-methyltransferase |
Protein accession | YP_003016469 |
Protein GI | 253687279 |
COG category | [R] General function prediction only |
COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAACA ACGTCATTTC ACCGGAATTT GATGAAAATG GACGCCCGAT GCGTCGTATC CGCAGTTTTG TCCGCCGTCA GGGACGTTTG ACCAACGGAC AACAGCTGGC GCTGGATAAC TACTGGCCGG TGATGGGCGT GGAATATCAG ACCGAACAGG TAGATTTTAA CGCGCTATTT GGTCGTGACG CGCCAGTGGT GCTGGAAATT GGTTTTGGGA TGGGCGCCTC GCTGGTGACG ATGGCGGCAC AGCATCCCGA ACAGAATTTC CTCGGTATTG AAGTTCACCT GCCGGGCGTG GGGGCGTGCC TCGCTTCCGC ACAGGAGGCG GGAATCAGCA ATCTGCGCGT GATGTGTCAC GATGCGATCG AAGTGCTGAT GAAGATGATC CCCGATGGTT CACTGTCCAT GGTTCAACTC TTCTTCCCCG ATCCGTGGCA CAAAGCCCGT CATAATAAAC GTCGCATCGT TCAGGTGCCT TTCGTCGAAC TGGTACAGAG TAAGCTGAAA GTCGGCGGTG TGTTCCATAT GGCAACAGAT TGGGAACCTT ATGCGCAACA TATGCTCGAA GTGATGACGT CTGTCGCCGG GTACCGCAAC CTTTCCGATA AGAATGACTA CGTTGAGCGG CCGGATTCTC GACCGCTGAC GAAATTTGAA GCGCGCGGCC AGCGTTTGGG GCATGGCGTA TGGGATCTGA TGTTTGAGAG GATAAAATAA
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Protein sequence | MINNVISPEF DENGRPMRRI RSFVRRQGRL TNGQQLALDN YWPVMGVEYQ TEQVDFNALF GRDAPVVLEI GFGMGASLVT MAAQHPEQNF LGIEVHLPGV GACLASAQEA GISNLRVMCH DAIEVLMKMI PDGSLSMVQL FFPDPWHKAR HNKRRIVQVP FVELVQSKLK VGGVFHMATD WEPYAQHMLE VMTSVAGYRN LSDKNDYVER PDSRPLTKFE ARGQRLGHGV WDLMFERIK
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