Gene PC1_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0878 
Symbol 
ID8131804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1021948 
End bp1022991 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content53% 
IMG OID644864159 
Producthypothetical protein 
Protein accessionYP_003016464 
Protein GI253687274 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATGGC GTATCACGAT AGGTTTAGTC ACTAATTTAC TACTCAGCTT TGCCGTTCTG 
GCAAACACTG GCATTGGCTT TCAACACATA ACGTTAGCGG ATGAAGGCAA TAACAGGCCG
TTAGATGTCG CCGTCTTTTA TCCGGTTTCG TCATCATCGC AGGCGACGAC CATTGGCGAA
AACGCCGTCT TTCCCGGCAT AACGGTGAGT AAAAATGCCG CGCCTGAATC AGGTGAACAT
CCTTTGATTG TGGTTTCGCA CGGTTACGGT GGGAACTGGC TTAATCAACT CTGGCTGGCA
CAGGCGTTGG TTAAACAAGG CTATATTGTC GCTGCCCCTA ATCATCCCGG AACCACCACT
AAAGATATGC AGACAGAGAA GGCGCAGGAT TTGTGGCAAC GGCCTCATGA CATCAGCCGC
GTTGTCACCG CATTACTGGC TGCGTCAGAA AAGACGGGGC GAGTTGACGA GAAGCGGATC
GCTGCTGTCG GTCACTCACT CGGTGGATGG ACGGTGCTTG AGCTTGCTGG TGGGGGCTTT
AGTACGGAGC AATTTGAGAA GGATTGTCTG ACGCACGCCG GGCTGGCGTC CTGTAAAGTC
TATGAAAAGA TGCAAGTTGC AAAAAATGCC GCATCGCGCG CGCAGCTTGA TAAACCACTG
GTGGATCCGC GTATTAGCGC CGTGATTTCG CTGGATATGG GGCTGGCGAG AGGAATTACC
GCAGAGAGTC TGGCGGCAAT CAATATTCCC GTCTTGATCA TGGCGGCGGG GTATCCCAAT
GAAGAACTGC CTGCCGAACT GGAGTCTCAC GATCTGGCGC GGAAGCTGCC GCCAGCGCAC
TCAGCGTATA AGGAAATTGC CGACGCGACG CATTTTAGCT TCATGCAGCG TTGTAAACCG
GGTGCTGTTG AGATTATCAA CGCCGAGAAC CCGGGAGACG GCATGATCTG TCTTGACGGT
GGTGAACGCT CGCGTGAGCA GATCCATCAG GACGTCGCGA AAGATGTCAG AGAGTTTCTT
CAGGCGGCGT GGCAGAAACC GTAA
 
Protein sequence
MTWRITIGLV TNLLLSFAVL ANTGIGFQHI TLADEGNNRP LDVAVFYPVS SSSQATTIGE 
NAVFPGITVS KNAAPESGEH PLIVVSHGYG GNWLNQLWLA QALVKQGYIV AAPNHPGTTT
KDMQTEKAQD LWQRPHDISR VVTALLAASE KTGRVDEKRI AAVGHSLGGW TVLELAGGGF
STEQFEKDCL THAGLASCKV YEKMQVAKNA ASRAQLDKPL VDPRISAVIS LDMGLARGIT
AESLAAINIP VLIMAAGYPN EELPAELESH DLARKLPPAH SAYKEIADAT HFSFMQRCKP
GAVEIINAEN PGDGMICLDG GERSREQIHQ DVAKDVREFL QAAWQKP