Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0878 |
Symbol | |
ID | 8131804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1021948 |
End bp | 1022991 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644864159 |
Product | hypothetical protein |
Protein accession | YP_003016464 |
Protein GI | 253687274 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATGGC GTATCACGAT AGGTTTAGTC ACTAATTTAC TACTCAGCTT TGCCGTTCTG GCAAACACTG GCATTGGCTT TCAACACATA ACGTTAGCGG ATGAAGGCAA TAACAGGCCG TTAGATGTCG CCGTCTTTTA TCCGGTTTCG TCATCATCGC AGGCGACGAC CATTGGCGAA AACGCCGTCT TTCCCGGCAT AACGGTGAGT AAAAATGCCG CGCCTGAATC AGGTGAACAT CCTTTGATTG TGGTTTCGCA CGGTTACGGT GGGAACTGGC TTAATCAACT CTGGCTGGCA CAGGCGTTGG TTAAACAAGG CTATATTGTC GCTGCCCCTA ATCATCCCGG AACCACCACT AAAGATATGC AGACAGAGAA GGCGCAGGAT TTGTGGCAAC GGCCTCATGA CATCAGCCGC GTTGTCACCG CATTACTGGC TGCGTCAGAA AAGACGGGGC GAGTTGACGA GAAGCGGATC GCTGCTGTCG GTCACTCACT CGGTGGATGG ACGGTGCTTG AGCTTGCTGG TGGGGGCTTT AGTACGGAGC AATTTGAGAA GGATTGTCTG ACGCACGCCG GGCTGGCGTC CTGTAAAGTC TATGAAAAGA TGCAAGTTGC AAAAAATGCC GCATCGCGCG CGCAGCTTGA TAAACCACTG GTGGATCCGC GTATTAGCGC CGTGATTTCG CTGGATATGG GGCTGGCGAG AGGAATTACC GCAGAGAGTC TGGCGGCAAT CAATATTCCC GTCTTGATCA TGGCGGCGGG GTATCCCAAT GAAGAACTGC CTGCCGAACT GGAGTCTCAC GATCTGGCGC GGAAGCTGCC GCCAGCGCAC TCAGCGTATA AGGAAATTGC CGACGCGACG CATTTTAGCT TCATGCAGCG TTGTAAACCG GGTGCTGTTG AGATTATCAA CGCCGAGAAC CCGGGAGACG GCATGATCTG TCTTGACGGT GGTGAACGCT CGCGTGAGCA GATCCATCAG GACGTCGCGA AAGATGTCAG AGAGTTTCTT CAGGCGGCGT GGCAGAAACC GTAA
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Protein sequence | MTWRITIGLV TNLLLSFAVL ANTGIGFQHI TLADEGNNRP LDVAVFYPVS SSSQATTIGE NAVFPGITVS KNAAPESGEH PLIVVSHGYG GNWLNQLWLA QALVKQGYIV AAPNHPGTTT KDMQTEKAQD LWQRPHDISR VVTALLAASE KTGRVDEKRI AAVGHSLGGW TVLELAGGGF STEQFEKDCL THAGLASCKV YEKMQVAKNA ASRAQLDKPL VDPRISAVIS LDMGLARGIT AESLAAINIP VLIMAAGYPN EELPAELESH DLARKLPPAH SAYKEIADAT HFSFMQRCKP GAVEIINAEN PGDGMICLDG GERSREQIHQ DVAKDVREFL QAAWQKP
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