| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0873 |
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| Symbol | |
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| ID | 8131799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1016157 |
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| End bp | 1017608 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864154 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003016459 |
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| Protein GI | 253687269 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.809964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAC ATTCCTCCCC TCATAGCGAG CATCATGCCG CCGGGCAACG CCTCCACGAA
AAGGGTTATC ACCAAAGTAT CGGCAACCGC CACGTACAGA TGATCGCGAT CGGCGGCTCC
ATCGGCACCG GATTATTTCT TGGCGCGGGT GCGCGTCTGC AAATGGCTGG GCCCGCGCTG
GCGCTGGTCT ATCTGGTTTG CGGTATCTTC TCTTTTTTCA TCCTACGAGC ACTGGGTGAG
CTGATCGTTC ATCGCCCCAC CAGCGGTAGC TTCGTCTCGT ATTCACGCGA GTTTCTGGGT
GAAAAGGCTT CCTACGTGGC TGGCTGGATG TACTTCCTCA ACTGGGCGAT GACCGGGATT
GTCGACATCA CCGCCGTCGC ACTCTACATG CACTACTGGG GCACCTTTGC CGATGTCCCG
CAGTGGCTGT TTGCGCTGGG TGCGTTATCC ATCGTCACGC TGATGAACCT GATTGGCGTG
AAGTGGTTTG CCGAAATGGA GTTCTGGTTC GCGCTGATTA AGGTTGCGGC TATCGCCATT
TTTCTGGTGG TCGGTACGGT CTATCTCGGC ACGGGCAGCC CGCTGGACGG CAACACGCCC
GGCCTGCATC TGATTACCGA TAACGGCGGC CTGTTCCCAC ACGGTATTCT GCCCGCGCTG
GTGCTGGTTC AGGGGGTGAT ATTTGCCTTT GCCGGCATCG AGATCATCGG GACAACCGCA
GGCGAATGTA AAGACCCGGA GAAAGTGCTG CCGAAAGCGG TCAACAGCGT CATCTGGCGT
ATCGGCCTGT TCTACGTCGG TTCTGTCGCG CTGTTGGTCT GCCTGCTGCC GTGGAACGCC
TATCAGGCAG GACAAAGCCC GTTCGTGACC TTCTTCAGCA AGCTGGGCGT GCCCTATATC
GGCACGATCA TGAATATCGT GGTCCTGTCC GCCGCGCTGT CCAGCCTAAA CTCCGGCTTG
TACTCGACGG GGCGCATCCT GCGCTCGCTG TCGCTGGGCG GTTCGGCGCC CGCGTTCCTG
TCGAAAATGA GCACGCAGTC TGTGCCCTAT ACCGGCATTT TGGTCACGGT CGGCATCCAC
ATTATCGGTG TGGTGCTGAA CTATGTGGTG CCTTCGCAGG TGTTCGAGAT CGTTCTGAAT
ATCGCTTCGC TCGGCATTAT CTGTTCCTGG GCGTTCATCA TTCTGTGCCA AATGCAGCTG
CGCAAAGCGA TTCGTCAGGG GAAAGCCAAA CCGGTGGCAT TCAAAATGCC CGGTGCGCCC
GTGACATCGT GGCTGACACT GGCTTTTCTG GTAAGCGTGT TAGGATTGAT GGCGTTTGAT
TACCCGAACG GCACCTGGAC GATTGCGACG ATTCCGGTAC TGACGATCAT GCTGATTATC
GGCTGGCGCG GGCTGAAAAA GCAGCGTGAA GCCGTGGCGC TCGCCGACCA GCAGGAATCC
AGCCTGCGTT AA
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| Protein sequence | MTQHSSPHSE HHAAGQRLHE KGYHQSIGNR HVQMIAIGGS IGTGLFLGAG ARLQMAGPAL
ALVYLVCGIF SFFILRALGE LIVHRPTSGS FVSYSREFLG EKASYVAGWM YFLNWAMTGI
VDITAVALYM HYWGTFADVP QWLFALGALS IVTLMNLIGV KWFAEMEFWF ALIKVAAIAI
FLVVGTVYLG TGSPLDGNTP GLHLITDNGG LFPHGILPAL VLVQGVIFAF AGIEIIGTTA
GECKDPEKVL PKAVNSVIWR IGLFYVGSVA LLVCLLPWNA YQAGQSPFVT FFSKLGVPYI
GTIMNIVVLS AALSSLNSGL YSTGRILRSL SLGGSAPAFL SKMSTQSVPY TGILVTVGIH
IIGVVLNYVV PSQVFEIVLN IASLGIICSW AFIILCQMQL RKAIRQGKAK PVAFKMPGAP
VTSWLTLAFL VSVLGLMAFD YPNGTWTIAT IPVLTIMLII GWRGLKKQRE AVALADQQES
SLR
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