Gene PC1_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0862 
Symbol 
ID8131787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1004086 
End bp1005153 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content54% 
IMG OID644864143 
ProductAppr-1-p processing domain protein 
Protein accessionYP_003016449 
Protein GI253687259 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACAT TTACACAAGG CAACTTACTG GATGCGCCCG TGGAAGCACT GGTGAATACG 
GTTAATACCG TCGGTGTCAT GGGTAAGGGT ATCGCGCTGA TGTTCAAAGA ACGCTTTCCC 
GCCAATATGA AAGCCTACGC CCTCGCCTGC AAACAGAAGC AGGTGATGAC CGGCAAAATG 
TTTATTACCG AAACCGGCGA ACTGATGGGG CCGCGCTGGA TTGTCAACTT CCCTACCAAA 
CAGCACTGGC GAGCCGACTC GCGTATGGCG TGGATCGAAG ACGGTTTGCA GGACTTACGC 
CGCTTTTTGA TCGAGAAACA GGTGCAGTCC ATCGCCATTC CGCCACTGGG CGCGGGCAAC 
GGTGGCCTCA ACTGGCCGGA CGTCCGGGCG CATATTGAAT CTGCGCTAGG CGATCTTCAG 
GACATTAATA TCCTGATTTA TGAGCCCACC GAAAAATACC TGAACGTCGC CAAAAGCACC 
GGCGTAAAAA AGCTCACCCC TGCCAGAGCG ATGATCGCTG AACTGGTGCG CCGCTACTGG 
GTGCTGGGAA TAGAATGCAG CCTGCTGGAA ATCCAGAAAC TGGCATGGCT TTTACAACGC 
GCGATTGAAC TGCACCGGCA GGACGATGTG CTAAAACTGC GGTTCGATGC TCACTATTAC 
GGCCCCTACG CACCGAACCT GAGTCATCTG CTTAATGCGC TGGACGGCAC CTATCTGAAA 
GCCGAGAAAC GAATTCCAGA CAGTCAGCCG CTGGACGTGA TCTGGTTTAA CGATCGGGAG 
AAAGATCGCA TCGAAGCCTA TTTGAATAGT GAAGCCAAAG AGTGGCTCCC CGCGCTGAAA 
CAAGTCAGTC AGCTAATTGA CGGCTTTGAA TCTCCATTCG GTATGGAACT ACTGGCGACC 
GTAGACTGGC TGTTGGCCCG GGGGGAATGC CAGCCCACGC TGGATTCCGT TAAAGAAGGG 
CTGAGCCAGT GGCCTGCGGG TGAACGCTGG GCCAGCCGCA AGATGAAGTT ATTCGATGAT 
AATAATCTGC AATTCGCCAT TAACCGCGTA ATGGAGTTCC ATCGCTGA
 
Protein sequence
MITFTQGNLL DAPVEALVNT VNTVGVMGKG IALMFKERFP ANMKAYALAC KQKQVMTGKM 
FITETGELMG PRWIVNFPTK QHWRADSRMA WIEDGLQDLR RFLIEKQVQS IAIPPLGAGN 
GGLNWPDVRA HIESALGDLQ DINILIYEPT EKYLNVAKST GVKKLTPARA MIAELVRRYW 
VLGIECSLLE IQKLAWLLQR AIELHRQDDV LKLRFDAHYY GPYAPNLSHL LNALDGTYLK 
AEKRIPDSQP LDVIWFNDRE KDRIEAYLNS EAKEWLPALK QVSQLIDGFE SPFGMELLAT 
VDWLLARGEC QPTLDSVKEG LSQWPAGERW ASRKMKLFDD NNLQFAINRV MEFHR