Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0848 |
Symbol | |
ID | 8131773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 985617 |
End bp | 987593 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644864129 |
Product | Site-specific DNA-methyltransferase (adenine-specific) |
Protein accession | YP_003016435 |
Protein GI | 253687245 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2189] Adenine specific DNA methylase Mod |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.561376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAATG AACGTATTAC TGAACATAGC GCTAAACAGA AAGAAAATGC TGAATCGAGT TGCAGTATTG ATGCTCTGGC CGAGCGCAGA CAGGATGAGT CTTGTTCACC ACTACACAAC GATCTTTTTG ATATCCCAAG CAGTACCCCT AATTTCCGCA CCGAACTAGC TGCTCAGCTT GCCGAGCTGA TTCCCGAGGC TGTTGCTGAT GGTAAGCTGG ACGTTGAAAA ACTTCGCGAG CTGCTGGCCG ATGATGCCGC TGATAGTAAC GAGCGCTTTG GCCTGTTCTG GCCGGGGAAA AAGTGTGCTC TGCGTGCCGC ACAAGCCCCG ACAACTGCAA CACTGAAACC AGACTTTGCT AACTCAAAAG ACTGGGACAC GACGCAGAAC GTGTTTATCG AGGGAGACAA TCTCGAGGTT CTGAAGATCC TGCAACGGCA CTATCACAAC AAGGTCAAGC TGATTTATAT CGACCCGCCT TATAACAAAG GCAAGGATTT TATTTACCCC GATAACTACA AGGAGGGGCT GAACAGCTAT CTGGAGTGGA CACGGCAGGT GAACGAGGAA GGTAAAAAAG TTTCCACCAA TAGCGAAACC GAAGGACGCT ATCACTCCAA CTGGCTGAAC ATGATGTATC CACGTCTGAA ATTAGCCCGT AATCTGCTTA CCGATGATGG CGTGATTTTT ATTTCGATTG ATGATAATGA ACAGGACAAC CTGAAGAAGT TGTGTAATGA GGTTTTTGGT GAAGGGAATT TCCTTGGGCA GATAGTGTGG AAAAAGAAAA CAAACGGCAA CAATATGGGC GTTATTCCAC CCGTTCATGA TTATATTGTT GTTTATTCAA GGCGACTTTC GGACGCACTA AACATTGGTT ATCCGATTAC TCAAGAACAT ATCGAAAAAA CGTATTCTAA TCCTGACGAT GATCCGCGGG GCCCTTGGAC AACAATGGAC TTATCTGCAA ATCATAAGGG GCCGTATTTC GCGATAAAGA ATCCGGAAAC AGGCCAAGAA TTTTATCCAT CGGAGGGACG CTTCTGGGTA TTTAATGAAA TAGAGGTTCT AAGACGTATT ACGGATGGCA GAATTATTTT TGGTAAATCG GGAACAACGC GCCCAGTCCA GAAGGTATTT GCGGCTGAAA GAGCAGAAAA GAAAATTCGT GCTGAATCGT GGTGGGATAA TCATGGCATG AATGAAGACG CAACCAATGA AATTCGAAAT TTATTTGGGA AAAGTAAGTT ATTTACACAC CCAAAACCAT CACAGTTGCT TTATAACCTT GCAAAAATTG CAACGAATGA CAACTCTATT GTCTTAGACT TCTTCGCTGG CAGTGCCACC ACCGCCCACG CCGTAATGCA GCTTAACGCC GAGGACAACG GCAAGCGTCG CTTTATCATG GTGCAATTAC CCGAACCCAC GCCGGAAGAT TCCGAAGCGC GCAAGGCAGG CTTTGCCACT ATTGCTGATA TCTCGCGCAA GCGCATCGAG CTCGCAGGTG AGAAAATAAA ATCCGATGTT GCAGCAAGCC ATGTAGATAT CGGCTTCCGC GCCTATAAGC TGACGGATAC CAATTTCACC AAATGGCGCG TCACCAGCGA TATCGAACCT GACAAATTAA CCCAACATTT GCTCGACCTG CGTGATAGTA GCACTGATGA TGCCAGTCCA GACGACCTGC TTACTGAGCT GCTGCTGAAG CTCGGCTATT CGTTGAGCGA ACACCTCAGT ACTCAAGCTA TCGCTGGGTT AGATATACGT ACCATTGTAG GCGATGCCGA CAAGCCGCGC CTGCTGGCGT ATTTGAATGA GAGAACTAAG CCCACACTGG AACAATTGCG GGAACTGGTG AATGCCGAAC CTACGCGCCT GATCGTTCTG GAGGATGCCT TCCATGGCGA CGACGAACTG AAAACCAATA TTGCTCAATA TGCCAGGAGC AAAGGTATTG AGCTGAGGAC GGCGTGA
|
Protein sequence | MANERITEHS AKQKENAESS CSIDALAERR QDESCSPLHN DLFDIPSSTP NFRTELAAQL AELIPEAVAD GKLDVEKLRE LLADDAADSN ERFGLFWPGK KCALRAAQAP TTATLKPDFA NSKDWDTTQN VFIEGDNLEV LKILQRHYHN KVKLIYIDPP YNKGKDFIYP DNYKEGLNSY LEWTRQVNEE GKKVSTNSET EGRYHSNWLN MMYPRLKLAR NLLTDDGVIF ISIDDNEQDN LKKLCNEVFG EGNFLGQIVW KKKTNGNNMG VIPPVHDYIV VYSRRLSDAL NIGYPITQEH IEKTYSNPDD DPRGPWTTMD LSANHKGPYF AIKNPETGQE FYPSEGRFWV FNEIEVLRRI TDGRIIFGKS GTTRPVQKVF AAERAEKKIR AESWWDNHGM NEDATNEIRN LFGKSKLFTH PKPSQLLYNL AKIATNDNSI VLDFFAGSAT TAHAVMQLNA EDNGKRRFIM VQLPEPTPED SEARKAGFAT IADISRKRIE LAGEKIKSDV AASHVDIGFR AYKLTDTNFT KWRVTSDIEP DKLTQHLLDL RDSSTDDASP DDLLTELLLK LGYSLSEHLS TQAIAGLDIR TIVGDADKPR LLAYLNERTK PTLEQLRELV NAEPTRLIVL EDAFHGDDEL KTNIAQYARS KGIELRTA
|
| |