| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0847 |
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| Symbol | |
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| ID | 8131772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 984240 |
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| End bp | 985364 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644864128 |
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| Product | integrase family protein |
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| Protein accession | YP_003016434 |
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| Protein GI | 253687244 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.136673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAC GCATAAAAAA GATACTGTTA AGTAAAGCAT TGGATAAGTA TTTTTCCACG
GTTTCGCGAC ATAAACGTGG ACAATTGCAG GAGTTCTATC GAATCAACGT TATCAAGCGT
TCGCGCTTGG CTAATAGAAA TATGGATGAA ATTTCATCTA TAGATATTGC AGAATATAGA
GATAATAGAT TATCGGAATT TAACGCTAGA ACGCAAAAGC CGATAAGTGC GAATACTGTG
CGACTGGAAT TAGCATTGTT ATCGGCGCTT TATAATCTGG CAAAAGTTGA GTGGGGTACA
TGCTCTATAA ACCCCGTTGA AAATGTTCGC AAGCCTACCG TATCGTCAGG TCGTACCCGG
AGGCTAACGA CTCAGGAAGA ACGGCAGCTA ACCAGATACT TCAAAGATAA AAATCCTGAA
TTATTGGCTA TTTTTCAGAT CGCGTTGGAA ACGGGAATGC GGCAAGGCGA AATTTTGTCG
TTGCGATGGG AATATACCGA TCTTCGCCTT GGCGTTGCCC ATTTACCTTT GACGAAAAAT
GGGACATCAC GAGACGTTCC ATTATCATCA AAAGCACGGC AAATTCTGTA TGGCCTGGGT
GAACGGCCAC ATCATGAGAA TGGCTATATT TTTAGCTACA CGTCGAGTGG GTTTAAAAGC
GCATGGCGTG TGGCTCTGAA GGCTCTGGCT ATCGACGATC TGCATTTTCA CGATCTCAGA
CATGAGGCAA TCAGCCGATT CTTTGAACTG GGAACATTAA ATGTTATGGA AGTGGCGGCA
ATATCAGGCC ATAAATCAAT GAATATGTTA AAACGCTATA CCCACCTTCG TGCAGCTCAC
CTCGTGAATA AGCTTGATGC ACATAAGAAA CAGGCTAAAA AACTAGCCTC CATCTTTATT
CCCTACCCAG CGGATATTGA TATCGATGAT ACAACGGTTA CGCTGAAATT CTCCGATCTT
GATAACCTGT CTGTGACGGC TTCAACGCAT GATGATGCTC TGAAAATTGC CTCTGTGGAA
TTACTTCGAT TTCAGGCTAT AGCAGCGAAA AATGGGAAGA GACTTCCGCC ACCCGGAGCT
ATCTCAGTCA ATTCGATTGA TCGAGTTCTT ATCAGTCCAC TGTAA
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| Protein sequence | MKKRIKKILL SKALDKYFST VSRHKRGQLQ EFYRINVIKR SRLANRNMDE ISSIDIAEYR
DNRLSEFNAR TQKPISANTV RLELALLSAL YNLAKVEWGT CSINPVENVR KPTVSSGRTR
RLTTQEERQL TRYFKDKNPE LLAIFQIALE TGMRQGEILS LRWEYTDLRL GVAHLPLTKN
GTSRDVPLSS KARQILYGLG ERPHHENGYI FSYTSSGFKS AWRVALKALA IDDLHFHDLR
HEAISRFFEL GTLNVMEVAA ISGHKSMNML KRYTHLRAAH LVNKLDAHKK QAKKLASIFI
PYPADIDIDD TTVTLKFSDL DNLSVTASTH DDALKIASVE LLRFQAIAAK NGKRLPPPGA
ISVNSIDRVL ISPL
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