| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0841 |
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| Symbol | |
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| ID | 8131766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 980121 |
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| End bp | 981308 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864123 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003016429 |
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| Protein GI | 253687239 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.275018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAT GTATAGCGGC AAGTGAGGCC ATCGCGCCCG CAAAACCCGC CTGGCGAGCC
GTTTATTCAC TGGGACTGGG GGTATTTGGC CTGATTACGG CTGAGTTTCT ACCAGCCAGT
TTATTAACGC CGATGGCGAC CAGTTTAGGC GTCACGGAGG GAATGGCAGG CCAGGCGGTG
ACCGCGACGG CACTGGTCGC GCTGGTGACC GGATTGCTCA TCACGCCGGC GACCAAAAGT
ATCGACCGCC GTTGGGTGTT GATGTTTTTC TCGGTGCTGC AAATCATCTC CAGCCTGCTG
GTGGCGTTTG CACCCAATCT GCATGTGCTG CTATTCGGGC GTTTACTACT AGGCGTTGCC
ATTGGCGGGT TCTGGGCTAT GTCCACCGCC ACGGCGATGC GTCTTGTGCC TAAGGATAAA
GTACCTAAAG CACTCGCGGT GATCTTCTCC AGCGTGTCGA TTGCCACCGT CGTTGCCGCG
CCGCTTGGCA GCTATTTGGG GAGTTTGATT GGCTGGCGAA ACGTCTTTAT TCTCTGCATT
CTGCCGAGCG TTGTGGCACT GTTTTGGCAA TTGTGGGTGT TGCCATCGAT GAAACCGGAA
AGCAGCGGTA GCCTTGGAAC ACTGCTTCGC GTGCTGCGCC GTCCGGGCAT GATCGGCGGA
CTGCTAGCAA CCGTGCTGAT CTTCAGCGGA CATTTCGCCT TCTTCACCTA CCTGCGACCG
TTTCTGGAAA CCGTCGGGCA GGCGAGTGTC GAAAGCATTT CCCTGATTTT ACTCGGCTTT
GGCCTCGCCA ATTTTGTCGG AACCTCGATT GCTGGGTATC TGCTGGCGCG AAACTTACGC
CTGACGCTGG CGCTGGTGCC CTTTGTGATG GGCGTTCTGG CGCTGACCAT GGTGGCCTTT
GGACATCTGG CGATGCTGGA CGGCCTGCTG GTAGCAATGT GGGGATTTGC GTTTGGTCTG
GTTCCCGTAG GCTGGTCAAC CTGGCTTGCG ACCACCGTGC CGGACGAAGC CGAAAGCGCG
GGTGGCTTAC TGGTGGCATC AATCCAGTTT GCCATCGGGG CGGGTGCCGC AGGCGGCGGG
ATGATATTTG ACCTCAACGG AGCAAGCGGT GTATTTGCGG GCAGCGGAAT ATTACTGGTA
TCGGCAATGG TGATTGTGTT TGCGGGCGTA CGGGTTCGCA CACAATAA
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| Protein sequence | MNSCIAASEA IAPAKPAWRA VYSLGLGVFG LITAEFLPAS LLTPMATSLG VTEGMAGQAV
TATALVALVT GLLITPATKS IDRRWVLMFF SVLQIISSLL VAFAPNLHVL LFGRLLLGVA
IGGFWAMSTA TAMRLVPKDK VPKALAVIFS SVSIATVVAA PLGSYLGSLI GWRNVFILCI
LPSVVALFWQ LWVLPSMKPE SSGSLGTLLR VLRRPGMIGG LLATVLIFSG HFAFFTYLRP
FLETVGQASV ESISLILLGF GLANFVGTSI AGYLLARNLR LTLALVPFVM GVLALTMVAF
GHLAMLDGLL VAMWGFAFGL VPVGWSTWLA TTVPDEAESA GGLLVASIQF AIGAGAAGGG
MIFDLNGASG VFAGSGILLV SAMVIVFAGV RVRTQ
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