Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0840 |
Symbol | |
ID | 8131765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 979565 |
End bp | 979987 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644864122 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003016428 |
Protein GI | 253687238 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.779945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA ACAGTACATT GGGTGAATTG CTGTGCTTCT CTTTGTATTC GGTCGCCAAT GCACTGATTC GTCAGTATCG ACCGCTGCTG AAAGAATTCG ATCTGACCTA CCCGCAGTTT GTCGTCCTTC TGTCCCTGTA CGATCAGGAC AATATCCTGC TCAAAGAATT GAGTGAGAAA ACGCTGTTTG ATTCAGGCAC GCTGACGCCG CTTGTCCAGA AACTGGAAGC CAAGGAGTTT TTAAACCGGG TTGCGGTTGC GGGTGATGAG CGCATGAAAA AAGTGGTTCT GACTGACAAG GCGCTTGCGC TGAAAGAACG GATTGTCGAT CTTCCGAATC AGATGCGTTG TTCCATGCGG ATGAACGATG ACGATCTGAA TATGCTGCGA CAGCTTTCCA AAAATCTATT GGAAGATTTA TAG
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Protein sequence | MKENSTLGEL LCFSLYSVAN ALIRQYRPLL KEFDLTYPQF VVLLSLYDQD NILLKELSEK TLFDSGTLTP LVQKLEAKEF LNRVAVAGDE RMKKVVLTDK ALALKERIVD LPNQMRCSMR MNDDDLNMLR QLSKNLLEDL
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