Gene PC1_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0794 
Symbol 
ID8131719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp926771 
End bp927427 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content59% 
IMG OID644864078 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_003016384 
Protein GI253687194 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID[TIGR00568] DNA alkylation damage repair protein AlkB 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.247111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTTG ATTTATTTGC CGATGAAGCG CCGCGTCGCT GGACGGAAAC GCTGGCTTCG 
GGGGCGTTTA TCCTGCGTGG ACGCGCCTAT GACGACGCTC CGGCGTTGCT TGCGGCCTTG 
CAAGCTGTCA CGGCGCGTGC GCCGCTGCGG AATATGGTGA CGCCAGGCGG CTTTGTGATG 
TCGGTGGCGA TGAGCAACTG CGGGAAACTC GGCTGGGTGA CGGATGAACG CGGCTATCGC 
TATACCTCAC ACGATCCACT GAGCGGAGAG GCGTGGCCCG ACATGCCGGA GGTATTTTCC 
CGGCTGGCGC AGCAGGCGGC ACGTGAAGCT GGTTTTGCTG ATTTTGAACC GGATGCCTGC 
CTCATCAACC GCTATGACGT CGGCACGCGC ATGTCTCTGC ATCAGGATAA AAATGAACGG 
GATTTTCGTC AGCCGATCGT GTCTGTCTCG CTGGGGCTCA GCGCGACGTT CCTGTTTGGC 
GGCATGGCGC GCAGTGATAA AGTGCAGCGT GTTGCGCTGA CGCATGGCGA TGTGGTGGTC 
TGGGGCGGTG AATCACGGCT CTATTTCCAC GGTATTCTGC CATTGAAAAG CGGCGGCGTG 
CCGGAAGGGA TGTCCGACGA ATGTCGTTTT AACCTGACAT TTCGTAAAGC TGGATAG
 
Protein sequence
MNFDLFADEA PRRWTETLAS GAFILRGRAY DDAPALLAAL QAVTARAPLR NMVTPGGFVM 
SVAMSNCGKL GWVTDERGYR YTSHDPLSGE AWPDMPEVFS RLAQQAAREA GFADFEPDAC 
LINRYDVGTR MSLHQDKNER DFRQPIVSVS LGLSATFLFG GMARSDKVQR VALTHGDVVV 
WGGESRLYFH GILPLKSGGV PEGMSDECRF NLTFRKAG