| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0781 |
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| Symbol | ribB |
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| ID | 8131706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 913584 |
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| End bp | 914237 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864065 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_003016371 |
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| Protein GI | 253687181 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0028978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAGA CATTACTTTC TGAATTTGGC AATCCTGCTG AACGCGTAGA ACGCGCACTT
GATGCATTGC GTCATGGCCG CGGCGTGCTG GTGTTGGATG ATGAAGATCG TGAAAACGAA
GGTGACATGA TCTTCTCCGC TGAAAATATG ACCGTTGAAC AGATGGCGCT GACGATTCGT
CACGGTAGTG GCATCGTGTG TCTGTGCCTG ACGGAAGAGC GTCGCCAGCA GTTGGAATTG
CCGATGATGG TGGAGAAGAA CTCCAGCCAT TACCAAACGG CGTTCACCGT AACCATCGAA
GCCGCCGAAG GCGTGACGAC GGGGGTTTCT GCTGCGGATC GTCTGACGAC TATTCGTGCC
GCAATTGCGG ATAACGCCAA GCCGAGCGAT CTGAATCGTC CTGGCCACGT ATTCCCGCTG
CGCGCCCAGC CGGGTGGCGT GTTAACGCGC GGTGGTCACA CCGAAGCAAC GGTTGACCTG
ATGACGCTGG CGGGCCTGAA GCCGTCTGGC GTTTTGTGCG AACTGACGAA CGATGATGGC
TCAATGGCGC ACGCGCCGGA AGTGATCGCG TTTGCCAAAC AGCACGATAT GCCGGTACTG
ACGATTGAAG ATCTGGTGGC TTACCGCGTA GCGGCAGAGC GCAAAGCCAG CTGA
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| Protein sequence | MNQTLLSEFG NPAERVERAL DALRHGRGVL VLDDEDRENE GDMIFSAENM TVEQMALTIR
HGSGIVCLCL TEERRQQLEL PMMVEKNSSH YQTAFTVTIE AAEGVTTGVS AADRLTTIRA
AIADNAKPSD LNRPGHVFPL RAQPGGVLTR GGHTEATVDL MTLAGLKPSG VLCELTNDDG
SMAHAPEVIA FAKQHDMPVL TIEDLVAYRV AAERKAS
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