| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0757 |
|---|
| Symbol | |
|---|
| ID | 8131682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 883365 |
|---|
| End bp | 884297 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644864041 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_003016347 |
|---|
| Protein GI | 253687157 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACG TCAACGCGGT AAAACATTTT TTGCTTAGCT TACAGAAGGA TATCTGTCAG
CAGCTTGCAG CGATCGATGG CGGAGCTGAT TTCGCCGAGG ATGAATGGCA GCGTGCCGAA
GGCGGCGGCG GGTGCAGTCG CGTGCTGTCC GGCGGGCGCG TCTTTGAACG AGCCGGCGTA
AACTTTTCCC ACGTTACCGG TAAGTCATTG CCGCCTTCAG CCAGCACCCA TCGTCCCGAT
CTGGCGGGCC GCAGCTTTCA GGCGATGGGC GTGTCGCTGG TCATTCACCC ACTGAGCCCT
TACATCCCCA CCAGCCATGC CAATGTGCGC CTGTTTATCG CCGAGAAACC GGGAGAAGAA
CCCGTCTGGT GGTTTGGCGG CGGGTTCGAT CTCACGCCCT ATTATGGTTT CAAAGAGGAT
GCGGTGCACT GGCACCAGAC CGCTCACGAC CTATGTCAGC CGTTCGGTGA CGAGGTATAC
CCGCGCTATA AAAAGTGGTG CGACGATTAC TTCTTCCTAA AACACCGTAA CGAAGCACGC
GGTATCGGCG GGCTCTTTTT CGACGATCTC AACGAGCCAG ATTTTGCTAC CAGCTTCGCC
TTCATTCGTG CCGTCGGTAA CGGGTTCCTC GATGGCTATT TGCCCATCGT CGAGCGGCGT
AAAGATCTGC CGTGGGGAGA GCGCGAGCGC GAATTCCAGC TCTATCGTCG TGGTCGCTAT
GTGGAATTTA ACCTGATTTG GGATCGCGGT ACGCTGTTTG GCCTGCAAAG CGGCGGGCGC
ACCGAGTCAA TTTTGATGTC CATGCCGCCG CTGGCGCGCT GGGAATATCA GCACCAGCCT
GAGCCGGGTA GTCCAGAAGC CCTGCTGTAT CAAGATTTTT TACCGGCCAG AGACTGGCTG
GCAGAAAGTC ACACGCACAA CAAGGAAGCA TAA
|
|---|
| Protein sequence | MSDVNAVKHF LLSLQKDICQ QLAAIDGGAD FAEDEWQRAE GGGGCSRVLS GGRVFERAGV
NFSHVTGKSL PPSASTHRPD LAGRSFQAMG VSLVIHPLSP YIPTSHANVR LFIAEKPGEE
PVWWFGGGFD LTPYYGFKED AVHWHQTAHD LCQPFGDEVY PRYKKWCDDY FFLKHRNEAR
GIGGLFFDDL NEPDFATSFA FIRAVGNGFL DGYLPIVERR KDLPWGERER EFQLYRRGRY
VEFNLIWDRG TLFGLQSGGR TESILMSMPP LARWEYQHQP EPGSPEALLY QDFLPARDWL
AESHTHNKEA
|
|---|
| |