| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0753 |
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| Symbol | |
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| ID | 8131678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 877846 |
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| End bp | 878844 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864037 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_003016343 |
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| Protein GI | 253687153 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.245916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACCCTAA GCGAAACCAA AATGGGTTTA GCCATGAGTG AATTTGATTC AGACAGTGAA
TTACTAACGG AAATAGCCGT CGCGTATTAT GAAAATCAAC AAACGCAGGA AGAGATTGCC
AGCCGCTTTG GTATCTCGCG TATCAAAGTC GGACGTTTGT TGAAGCGGGC GCGGGCGGAA
GGGATCGTTG AAATCAATGT CCGCTATCAT CCGGTATTTA GCTCTCAACT TGAACAACAG
TTTATTAAGA GCTTTGGCAT CAAGCGTGCG TTGATTGCGA TCGATCACCA TGATGAGGAT
GAACAGCGCC AGCAGGTGGC ATCGCTGGTG TCTACTTACT TGTCCAGTAT TTTAAAAAAT
GGCATGTCCG TGGCGGTCGG GCAGGGGCGC AATGTGGCTG CTGTCGCCAG TCATGTGGGC
GTGTTTCCTG AACGGCACTG CAAGTTCATC TGTGGCATTG GCGGCACGCA GCGTGATGGA
GAACTGATCG ATGCCGATCA TATCAGCCGT CATCTGGCGC GGAAATTTAA TGCTACGAGC
GAAACGCTGT ACGCGCCCGC TTATGTTGAA AATTCGGCGC TGAAATCCTC CTTTATGCAA
AACCGTTTGA TCAATGACAC GCTTGAGCGT GCAAGCAAGG CGGATATTGC GCTGGTGGGA
TTAGGCGACA TGAACGAAAA CAGTTTCATG GTTCAGCTCG GCTGGTTTAC CTCGCAGGAG
ATTATTACGG CACGCCAGGA TGAGGGGGTG GTCGGCGATA TCGCTGGGTA TGCTTTTCTG
GATATTCAGG GGCGGCCTGT GGATACGGTG ATGAACGATA GAGTCATCGG GCTGAGTCTC
GATCAGTTAC GCAAGATCCC TTATGTGATA GCGATCGCCT CTGAAAACAC CAAAGCAACG
GCGATTCTGG CTGCGCTGCG TTCTGGCATT GTGGATGTGA TCGCCACCAG CGCCAGCAAT
GCCCGCACGG TGTTGAGTTT GATCTCCGCC AAACACTAG
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| Protein sequence | MTLSETKMGL AMSEFDSDSE LLTEIAVAYY ENQQTQEEIA SRFGISRIKV GRLLKRARAE
GIVEINVRYH PVFSSQLEQQ FIKSFGIKRA LIAIDHHDED EQRQQVASLV STYLSSILKN
GMSVAVGQGR NVAAVASHVG VFPERHCKFI CGIGGTQRDG ELIDADHISR HLARKFNATS
ETLYAPAYVE NSALKSSFMQ NRLINDTLER ASKADIALVG LGDMNENSFM VQLGWFTSQE
IITARQDEGV VGDIAGYAFL DIQGRPVDTV MNDRVIGLSL DQLRKIPYVI AIASENTKAT
AILAALRSGI VDVIATSASN ARTVLSLISA KH
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