| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0752 |
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| Symbol | |
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| ID | 8131677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 877051 |
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| End bp | 877845 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864036 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_003016342 |
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| Protein GI | 253687152 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.633996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TGATGATAGG GACGAGCTGG AAAATGAATA AGACCCGGCA GGATGCGATG
GACTACTGCG CGGTGCTATC CAGACAGCTT AACGATGCGG CGGGTGCAGG CATTCAGCCT
TTTGTCATTC CCCCTTTTAC GCTGATCAGG GAGGTGACCG AGTTCCTGTC TGCGCAAAAG
GTAAACTGCC TGACAGGGGC GCAGAATATG CACTATGCTG ACAGCGGCGC GTGGACTGGA
GAGGTTTCTC CGCTGATGGT CAGTGATTGC GGCGCGTCGC TTGTCGAGCT GGGGCATTCC
GAGCGCCGGC AGCACTTTGC GGAAAACGAT GCGGATATTC AGAAAAAAGT GCAGGCCGCG
CTGCGTTATC AACTGCGTCC GCTGGTTTGC GTAGGTGACA GTGCGCAAGA GAAAGCGTGG
GGCGTTTCTA AAGAAACCGT CATTCGGCAA ATGAAAATTG CGCTTGCGGG TTTACACGTG
CAGCAGGCGG AAAAGGTCAT CATTGCGTAT GAACCTATCT GGGCCATCGG TGAAGGGGGA
ACACCCGCCA CCGCACAGGA AGCGCAAGAT ATTCACTCTG CCTTGCGTCA GGCGCTGGTT
GCCCTTTATG GCGAAGACAT TGCCTCTCGT ATTACGCTTC TGTACGGCGG CAGCGTGAAT
CCGCATAATA CGGGCGAACT TATTCAATGC GCCGATATTG ACGGGTTATT TATTGGCAGG
TCTGCATGGG ATGCGGAGAA TTTCTGCCAG CTGGTGCGCA GTGTTTCAGC ATTGTTGAAT
GAACAGGGTG AGTGA
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| Protein sequence | MKKVMIGTSW KMNKTRQDAM DYCAVLSRQL NDAAGAGIQP FVIPPFTLIR EVTEFLSAQK
VNCLTGAQNM HYADSGAWTG EVSPLMVSDC GASLVELGHS ERRQHFAEND ADIQKKVQAA
LRYQLRPLVC VGDSAQEKAW GVSKETVIRQ MKIALAGLHV QQAEKVIIAY EPIWAIGEGG
TPATAQEAQD IHSALRQALV ALYGEDIASR ITLLYGGSVN PHNTGELIQC ADIDGLFIGR
SAWDAENFCQ LVRSVSALLN EQGE
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