Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0746 |
Symbol | |
ID | 8131671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 870845 |
End bp | 871795 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644864030 |
Product | transaldolase A |
Protein accession | YP_003016336 |
Protein GI | 253687146 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAAC TCGACGCCCT TAAACAATTT ACCGTAGTGG TCGCCGATAG CGGCGATATC GACTCCATTC GTCAATTTTC ACCGCAAGAT GCCACCACAA ACCCCTCCCT AATTCTGAAA GCCGCCACTC TGCCGCAGTA TCAGCCGCTG TTTGATGACG CCATTGCCTA TGCGAATCAG CAAGGCGGTA GCTCGGAAAC GCGGCTCATC AATGCCAGCG ACCGACTGGC GGTAAACATC GGTGCGGAAG TGCTGAAAAG CATTCCGGGG CGCATCTCCA CCGAAGTCGA TGCCCGCCTC TCGTTCGACC GCGGGATGTG CGTCGCCAAA GCCCGCAAAC TGATTGGGAT GTATCAGGAA AAAGACATTC CGCGTTCACG CATTCTGATT AAGCTCGCCG CCACCTGGGA AGGGATTCGC GCCGCCGAAG AGCTGGAAAG AGAGGGGATT AACTGCAACC TGACGCTGCT GTTCTCGTTC GCACAGGCGC GCGCCTGTGC CGAAGCGGGT GTCTTTCTGA TCTCCCCGTT TGTGGGCCGG ATTTATGACT GGTATCAGGA AAGGCAACCC GCCAGCAACT ATCAGGCAGA CAACGATCCT GGCGTGATCT CCGTGCGTAA TATCTATGAC TACTACAAAC GCCACCGTTA CCAAACCGTC ATCATGGGCG CCAGCTTCCG CAAGGTGGAG CAGATTCTGG CGCTGGCCGG ATGCGATCGC CTGACGATCT CCCCTGCACT GCTGGAGCAG TTGAAAAACA GCGATGCGCC CGTTGAACGC CAGCTGACAC CATCAACCGA AGGGTTCCAT CATCCCTCTC CGCTGTCTGA AGCTGAATTC CGCTGGGAGC ACCATCAGGA TCCGATGGCC GTCGATAAAC TGGCGGAAGG CATTCGCCTG TTCGCTGCCG ATCAACAAAA GCTGGAAACG CTGCTGGCGG CCAAGCTGTA A
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Protein sequence | MNQLDALKQF TVVVADSGDI DSIRQFSPQD ATTNPSLILK AATLPQYQPL FDDAIAYANQ QGGSSETRLI NASDRLAVNI GAEVLKSIPG RISTEVDARL SFDRGMCVAK ARKLIGMYQE KDIPRSRILI KLAATWEGIR AAEELEREGI NCNLTLLFSF AQARACAEAG VFLISPFVGR IYDWYQERQP ASNYQADNDP GVISVRNIYD YYKRHRYQTV IMGASFRKVE QILALAGCDR LTISPALLEQ LKNSDAPVER QLTPSTEGFH HPSPLSEAEF RWEHHQDPMA VDKLAEGIRL FAADQQKLET LLAAKL
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