| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0745 |
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| Symbol | |
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| ID | 8131670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 868835 |
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| End bp | 870829 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644864029 |
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| Product | transketolase |
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| Protein accession | YP_003016335 |
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| Protein GI | 253687145 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.94211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCTC GTAAAGAACT TGCCAATGCT ATCCGCGCGC TGAGCATGGA TGGGGTGCAG
AAAGCCAAAT CCGGTCACCC GGGCGCACCG ATGGGCATGG CCGATATCGC CGGAGTCCTG
TGGCGCGATT ACCTCAACCA TAATCCGGCC AACCCCAACT GGGCCAACCG TGACCGCTTC
GTGCTGTCCA ACGGCCACGC GTCCATGCTG ATTTACAGCC TGCTGCATCT CTCCGGCTAC
GACCTGCCGA TTGAAGAACT GAAAAACTTC CGCCAGCTGC ATTCCAAAAC CCCGGGTCAC
CCGGAATACG GCTATACCGC CGGCGTTGAA ACCACCACTG GTCCACTGGG GCAGGGTATC
GCTAACGCAG TCGGGATGGC GATTGCCGAG CGCACGCTGG CGGCGCAGTT CAACCGTCCG
GGTCACGAGA TTGTCGACCA TCACACCTAC GCCTTCCTCG GCGACGGCTG CATGATGGAA
GGGATTTCCC ACGAAGTCTG CTCGCTGGCC GGCACCATGA AGCTCGGCAA GCTGACCGCG
TTTTATGATG ACAACGGCAT CTCCATCGAC GGCCACGTTG AAGGCTGGTT TACCGACGAT
ACCGCCGCCC GTTTTGAAGC CTACGGCTGG CACGTGGTGC GCGGCGTGGA CGGCCACGAT
GCGGACGCCA TCAAGCGTGC CATCGGTGAA GCTCAGCTGG TGACCGACAA GCCGTCGCTG
CTGATGTGCA AAACCGTGAT TGGCTTCGGT TCCCCGAACA AGGCCGGTAC GCACGACTCC
CACGGTGCGC CGCTGGGGGA TGCAGAAGTG GCGGCCTCCC GCGAACAGCT GGGCTGGACC
CACGCGCCGT TTGAGATTCC TGCTGATATC TATGCCGCCT GGGATGCGAA ACCGGCCGGT
CAGCGTAAGG AAGCCGCCTG GAACGAGGCG TTTGCCGCCT ACGCCAGCGC GTACCCGGAA
CTGGCTGCCG AGTTCACACG CCGCACCGGC GGCGAACTGC CAACCAACTG GCAGGCGGAC
GCGCAGAAAT TTATCGAAGA CTTGCAGGCC AACCCGGCGA AAATTGCCAG CCGCAAAGCC
TCACAGAACG CGCTGGAAGC CTACGGCAAA CTGCTGCCGG AATTTCTGGG CGGTTCAGCC
GACCTGGCAC CGAGCAACCT GACCATCTGG TCCGGCTCGG TATCGCTGGA TAAAGACCAC
GCGGGCAACT ACCTCCACTA CGGCGTGCGC GAATTCGGCA TGACGGCAAT TGCCAACGGG
ATTGCGCTGC ACGGTGGCTT TGTGCCGTAC ACCGCGACCT TCCTGATGTT TGTGGAATAT
GCCCGTAACG CCGTGCGTAT GGCCGCACTG ATGAAAATCC GCAGCATCTA CGTCTACACC
CACGACTCCA TCGGTCTGGG CGAAGACGGC CCGACGCACC AGCCGGTTGA ACAGCTGGCC
AGCCTGCGCG TGACACCGAA CATGAGCAAC TGGCGTCCGG CGGACCAGGT GGAAACGGCG
GTGGCGTGGA AATACGCGAT TGAGCGTCAG GACGGTCCGA CGTCACTCAT CCTGTCCCGT
CAGAATCTGG CGCAGCAGCC ACGTACTGCT GAGCAGTTGG CGAACGTGGC GAAAGGTGGC
TACGTGCTGA AAGACAGCGA CGGCCAGCCG GAGCTTATCC TGATTGCCAC CGGCTCTGAA
GTCGAGCTGG CTGTCGGGGC GTATGACAAG CTGACTGCCG CAGGCCGCAA GGTGCGCGTG
GTGTCGATGC CATCAACGGA TGCATTCGAC AAGCAGGATG CAGCCTACCG TGAAGCGGTG
CTGCCGAAGG CGGTATCGGC ACGCGTGGCG ATTGAAGCGG GTATCGCAGA CTACTGGTTC
AAGTATGTTG GCCTGAACGG CGCGATTGTC GGCATGACGA GCTTCGGCGA ATCGGCACCG
GCGGAGCTGC TGTTCGAAGA GTTCGGCTTC ACCGTCGATA ACGTGGTGGA AAAAGCGCAG
GCGCTGCTGC AATAG
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| Protein sequence | MSSRKELANA IRALSMDGVQ KAKSGHPGAP MGMADIAGVL WRDYLNHNPA NPNWANRDRF
VLSNGHASML IYSLLHLSGY DLPIEELKNF RQLHSKTPGH PEYGYTAGVE TTTGPLGQGI
ANAVGMAIAE RTLAAQFNRP GHEIVDHHTY AFLGDGCMME GISHEVCSLA GTMKLGKLTA
FYDDNGISID GHVEGWFTDD TAARFEAYGW HVVRGVDGHD ADAIKRAIGE AQLVTDKPSL
LMCKTVIGFG SPNKAGTHDS HGAPLGDAEV AASREQLGWT HAPFEIPADI YAAWDAKPAG
QRKEAAWNEA FAAYASAYPE LAAEFTRRTG GELPTNWQAD AQKFIEDLQA NPAKIASRKA
SQNALEAYGK LLPEFLGGSA DLAPSNLTIW SGSVSLDKDH AGNYLHYGVR EFGMTAIANG
IALHGGFVPY TATFLMFVEY ARNAVRMAAL MKIRSIYVYT HDSIGLGEDG PTHQPVEQLA
SLRVTPNMSN WRPADQVETA VAWKYAIERQ DGPTSLILSR QNLAQQPRTA EQLANVAKGG
YVLKDSDGQP ELILIATGSE VELAVGAYDK LTAAGRKVRV VSMPSTDAFD KQDAAYREAV
LPKAVSARVA IEAGIADYWF KYVGLNGAIV GMTSFGESAP AELLFEEFGF TVDNVVEKAQ
ALLQ
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