| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0744 |
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| Symbol | |
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| ID | 8131669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 866641 |
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| End bp | 868545 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864028 |
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| Product | PTS system, beta-glucoside-specific IIABC subunit |
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| Protein accession | YP_003016334 |
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| Protein GI | 253687144 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR01995] PTS system, beta-glucoside-specific IIABC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATC AAAAACTTGG AGTCGACATA CTCGCGTTAA GCGGCGGCAA GCAGAACGTC
AGCAAACTGA CCCACTGCGC CACCCGCTTA CGCTTTGAGT TCAACGACAG CCATGCCGTA
CAGGCAGAGG CGATTGCCAA ACTCCCCGGC GTCATCAGCG TCGTCGATCG CGGCGGTCAG
TTTCAGGTGG TGATCGGCAA CGATGTCCAA ATCACCTATC GCGCGATTTT GAACGAGATT
GGCGAGATGA ACGGCCAGCG CACTGCTGGC AGTAAAGAAC CGCAGAAGAA AGGCGGCATT
TTCTCGCAAA TCATCAGCGT GATTTCCACC ACCTTCACGC CCGTTATCCC GGCGATTACT
GGCGCAGGGA TGATTAAAGC CCTGTTGGCG ATCCTCAAGC TGACTGGGTT AATTTCCGCC
GACAGCACGA CCTATCGCCT GCTGGACACC ATCTCCGATG CGGCCTTCTT CTTCCTGCCT
GTGCTGCTGG CCTACGGTGC CTCCATCAAG TTCGCCTGTA ATCCGATTCT GGCGATGACA
ATCGCTGGCG CATTGCTGCA CCCGAATCTG GCTCAGCTAC TGGCCTCCGG CGGCCCTATC
AGCTTTATCG GTATTCCGGT ACGGCTGGCG GACTACGCCG GCTCGGTGTT GCCGATCATT
CTTACCGTAT GGATCATGTC TTACATCGAG CAATTTGCCG AAAAGATCTC GCCCTCGATG
ATCAAATTTT TCACCAAGCC GATGATCGTG CTGCTGTTTA CCGCGCCGCT CGCGCTGGTG
GTGATTGGGC CTTTCGGTAT ATTCCTCAAC GATTTGGTTG CCAGCGGTGC CGCTATCATC
GACGGAAAGG CGAGCTGGCT TATTCCGATG TTGATGGGTG GCCTGCAACC GTTTTTGGTC
ATCACCGGCA CCGCCTGGGC GATGACGCCG ATTGCCACCT CGCAGCTTAC CCGCAACGGC
TTTGAGATGA TCAACGGGCC CGGCATGCTG GCCTCCAACA TTGCGCAGGG TGCCGCCACG
CTGTGCGTCG CGTTTAAAAC CAAAAACAAG AATCTGAAAC AGCTGGCTTC TTCGGCGGGT
TTCACCGCTC TGCTGGGTAT CACCGAGCCT TCTCTGTACG GGGTGACGCT GAAGCTGAAG
AAACCGCTCA TTGCCGCCAT GATCGGCGGA GGCTGTGCAG GTATCTACGC CGGATTGGCC
GGGCTGGTTC GTTATGCCTT CGTCTCACCG GGGCTGGCAG CGCTGCCCGC CTTCATTGGT
GAAAACCCGA TGAACATCGT CCATGCACTG ATCACCTGCG CCATTGCGAT TGTCGTCACG
TTTGCCCTCA CCTGGATCAT GGGGTTCGAC GATCCGGTAG ATGAAACCGA CACCACATCA
ACCACCAATA GCCAGCCGAC ACCGGAAAAA GAGGCAACCC AAAAGCCGCA GGCGGCGCAA
GGCCACGCCG AAACGCAAAC GATTCAAAGC CCGATGTCCG GCAAGCTGGT CGCATTGAGT
GACATCAACG ATGACGTATT CTCACAGGGA TTATTGGGAC AAGGCGTGGC CATTATCCCC
GACAGCGGTG AAGTGATCGC GCCCGTCAGT GGCGAAATCA TCACGTTCCT TGAGTCTAAA
CATGCCGTCG GTATCCGCGC TGACAGCGGT TTGGAATTAC TGATTCATGT CGGCCTCGAT
ACGGTGAATC TCAACGGCAA GCACTTTACC GGCTATGTCA AACCGGGCGA CCGGGTTACT
GCGGGCGACA GGTTAATTAG CTTCGATCTG CATGAAATCA CGCGTTTGGG CTATGACCCG
ATTACGCCCG TGGTGATTAT CAACAGCGAT GACTACGCCA GCGTCGTCTG TACCGCACCA
CAGCCGATCG CGCCACGGGA CACCATCATT AACGTGCACG CCTGA
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| Protein sequence | MNYQKLGVDI LALSGGKQNV SKLTHCATRL RFEFNDSHAV QAEAIAKLPG VISVVDRGGQ
FQVVIGNDVQ ITYRAILNEI GEMNGQRTAG SKEPQKKGGI FSQIISVIST TFTPVIPAIT
GAGMIKALLA ILKLTGLISA DSTTYRLLDT ISDAAFFFLP VLLAYGASIK FACNPILAMT
IAGALLHPNL AQLLASGGPI SFIGIPVRLA DYAGSVLPII LTVWIMSYIE QFAEKISPSM
IKFFTKPMIV LLFTAPLALV VIGPFGIFLN DLVASGAAII DGKASWLIPM LMGGLQPFLV
ITGTAWAMTP IATSQLTRNG FEMINGPGML ASNIAQGAAT LCVAFKTKNK NLKQLASSAG
FTALLGITEP SLYGVTLKLK KPLIAAMIGG GCAGIYAGLA GLVRYAFVSP GLAALPAFIG
ENPMNIVHAL ITCAIAIVVT FALTWIMGFD DPVDETDTTS TTNSQPTPEK EATQKPQAAQ
GHAETQTIQS PMSGKLVALS DINDDVFSQG LLGQGVAIIP DSGEVIAPVS GEIITFLESK
HAVGIRADSG LELLIHVGLD TVNLNGKHFT GYVKPGDRVT AGDRLISFDL HEITRLGYDP
ITPVVIINSD DYASVVCTAP QPIAPRDTII NVHA
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