| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0740 |
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| Symbol | |
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| ID | 8131665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 861267 |
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| End bp | 862790 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644864024 |
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| Product | Arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_003016330 |
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| Protein GI | 253687140 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA ATAATTATTC AGGAATGATC TCTGTATTGT TAATGCTATT TATAGGATTC
ATGGCGACCA CTCTGGCTAA AGCGGCGCAG CCGTTTGCTT ATGGCGCAGA TATTGGTTGG
GTAAAGCAAT TGGAAGATCG GGGAGTCACC TGGCGTGACG ATACCGGAAC TCAGCGGGAT
GTATTGCAGA TATTGCGCGA TCACGGCATA AACGCTGTGC GGTTGCGTAT TTTTGTTAAT
CCCGATCCCA GCGCGTTATG GCATAAAGAT AATACGACCT GGACGCTGCT CGGCTATACG
GATAAAACTC GTGTGGTAGC AGTCGCACAG CGTGCGAAAG CGATGGGAAT GCGCGTCATG
GTGGATTTCC ACTACAGCGA TGTTTTCGCC GATCCTGGTC ATCAAATCAA GCCTGCTGCG
TGGGCGAATT ACAATCTTAG CCAGTTAACG ACGGCCGTTT ATAATCATAC ACATGAGGTG
ATGAGCGCGT TGATATCCGC AGGTGTGACG CCTGAGTGGG TGCAGGTTGG CAACGAAATG
AATCCGGGAA TTTTATTACC GGAAGGCAGT ACCAGTCGGT TTGCCAATTT AACGCAGCTA
CTGAATGCGG GCTATGATGC GGTTAAAGCG GTCAGTCCTT CCTCTAAGGT GATCAGCCAT
TTGGCGCATG GGGATAATAA TTCAAACGCT CGCTGGTTTT TTGACAATTT CCTCACCACG
CACGGTGGGA AAACCGATGT GATTGGTTTT TCATTCTATC CCTATTGGGA GGGAAAGAAC
TATTGGGAAC TCACTGGCGC ACTGGCTAGC AATCTCAATG ATATGGCGAG CCGGTATGGT
AAGGAAGTCA TGGTTGTTGA AGTCGGTGGT TTGGAAACTA ACCCGACAGA CAGTTACTGG
ACGATTAAGG ATACGATTAA TCTTGTTAAA GCGGTGCCGG GAAATAAGGG GATTGGGGTT
TTTTATTGGG AACCTGCGGG TAATGCCAGT GTGTTGCCGG ATGGCTATGC ATTAGGGGCG
ACGACGCGCG TTTCAAACAA TGTATTGCAA TTTACCCGGG CGCTGGACGC GTTTGCTGAA
TCGCAAATCA ATTTTATCAA CGGCACACGC TATAAGATCG CAAATCGGCA CAGCGGTAAA
TCGCTCAATG TCGTGGGCGG TTCGCATGAA GATAGCGCAT TGCTTGAACA ATACAGTGAT
GGCAACTGGG ACAGCCAGCG TTTTTATTTC AACGCGATTG GTAATGGTTA TTTTAATCTG
GTGAATGTTA ATAGTGGAAA GTACATCGAT ATTGCCTCCA GTGCCAATGA TGAAGGGGCG
CAAATTATCC AAATGTACAA CACCGGGCAT TTTAGCCAGC AGTGGCTGAT TTTGGATGCA
GGTGATGGCT ATTATAAAAT CATGAATAGA AATAGCGGAA AGCTTTTGGA TATCAGCAGT
CGCTCGACAG AGAATGGCGC AGCAGGTATC CAATGGAATG ATAACGGCGG ATGGAATCAG
CTATGGAAAA TAACCGCTAA TTGA
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| Protein sequence | MKKNNYSGMI SVLLMLFIGF MATTLAKAAQ PFAYGADIGW VKQLEDRGVT WRDDTGTQRD
VLQILRDHGI NAVRLRIFVN PDPSALWHKD NTTWTLLGYT DKTRVVAVAQ RAKAMGMRVM
VDFHYSDVFA DPGHQIKPAA WANYNLSQLT TAVYNHTHEV MSALISAGVT PEWVQVGNEM
NPGILLPEGS TSRFANLTQL LNAGYDAVKA VSPSSKVISH LAHGDNNSNA RWFFDNFLTT
HGGKTDVIGF SFYPYWEGKN YWELTGALAS NLNDMASRYG KEVMVVEVGG LETNPTDSYW
TIKDTINLVK AVPGNKGIGV FYWEPAGNAS VLPDGYALGA TTRVSNNVLQ FTRALDAFAE
SQINFINGTR YKIANRHSGK SLNVVGGSHE DSALLEQYSD GNWDSQRFYF NAIGNGYFNL
VNVNSGKYID IASSANDEGA QIIQMYNTGH FSQQWLILDA GDGYYKIMNR NSGKLLDISS
RSTENGAAGI QWNDNGGWNQ LWKITAN
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