Gene PC1_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0739 
Symbol 
ID8131664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp859969 
End bp861054 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content46% 
IMG OID644864023 
ProductABC transporter related 
Protein accessionYP_003016329 
Protein GI253687139 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATA TTTTACTAAA AAATATAGTG AAGCGTTACG ATAAGACGGA GACGATCCAT 
CGTATCAATC TTGAAATTAA TTCTGGCGAG TTCGTGGTAT TCGTTGGCCC ATCGGGATGC 
GGTAAATCGA CATTGCTGAG GATGATCGCT GGACTGGAAG AGATCACGGA TGGCGAAATT 
CATATTGATA ACCGTTTAGT TAACCATTTT GATCCCGCAG AGCGGGGGAT TGCGATGGTT 
TTCCAATCCT ATGCGCTGTA CCCGCATATG ACCGTGGCTG AAAACATGGG ATTTGGGTTA 
AGAATGAATG GGCGCCCTAA AGCCGAAGTC GAAGAGATGG TGCGGAAGGC GGCGATGACG 
CTTCAGTTAG AAGCCTTATT AGATCGTACA CCGAAGCAAC TGTCCGGTGG CCAACGTCAG 
CGTGTTGCAA TTGGGCGAGC CATTGTACGC GATCCTAAAG TGTTCTTATT CGATGAGCCG 
CTATCAAACC TCGATGCCGA ATTACGCGTG GAAATGCGTT TGCAGATTGC CCGGCTGCAC 
CAGGAAATGC GTAACACTAT GATCTATGTG ACGCACGACC AGGTAGAAGC GATGACGCTG 
GCGGATAAAA TCGTAGTGTT GAACAAAGGA TATATTGAGC AGGTTGGTAC ACCGATGGAG 
CTATACCATA AGCCAGAGAA TCTGTTTGTT GCTGGTTTTA TCGGTTCGCC GAATATGAAT 
TTTCTACCAG GCGAAGTCCT TCAGATTGAA GGCAATCGCG TGAGCATCTC GATCAATAAG 
CTCAATACAC TTTCAGTGAA TCTTGCCAGC CACGGATTGC ACACCGATCA GAAAATTACC 
GTGGGTATTC GTCCTGAGCA CCTGAGTATT GACCCGAATG GCGGGGATGT CAGTTTGTCG 
ATCAATAGTG AGGTTACTGA AAGGCTGGGT AATGCGACGT ATATTTTTGG TGCCTATTCT 
GGTGTGAATC ATTTCAAAGT GCATTTGTCG GGTGATAACA GTATTACGCC TTACTCAACG 
ATTCCGCTGA CATGTCGTAG TGAAAATCTG CATTTCTTTG ATGAAAATGG AAAGCGAATT 
AATTAA
 
Protein sequence
MADILLKNIV KRYDKTETIH RINLEINSGE FVVFVGPSGC GKSTLLRMIA GLEEITDGEI 
HIDNRLVNHF DPAERGIAMV FQSYALYPHM TVAENMGFGL RMNGRPKAEV EEMVRKAAMT 
LQLEALLDRT PKQLSGGQRQ RVAIGRAIVR DPKVFLFDEP LSNLDAELRV EMRLQIARLH 
QEMRNTMIYV THDQVEAMTL ADKIVVLNKG YIEQVGTPME LYHKPENLFV AGFIGSPNMN 
FLPGEVLQIE GNRVSISINK LNTLSVNLAS HGLHTDQKIT VGIRPEHLSI DPNGGDVSLS 
INSEVTERLG NATYIFGAYS GVNHFKVHLS GDNSITPYST IPLTCRSENL HFFDENGKRI 
N