Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0734 |
Symbol | gldA |
ID | 8131659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 854478 |
End bp | 855575 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644864018 |
Product | glycerol dehydrogenase |
Protein accession | YP_003016324 |
Protein GI | 253687134 |
COG category | [C] Energy production and conversion |
COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATT TCATTTTCTC TTCACCTAGA AAATATGTTC AGGGTCGCGG CGTACTGGAT GAGCTGGGCG AGCAGCTTAA GCCGCTGGGT ACGAAAGCCT TTCTGATGGC AGACGGCATC GTGTGGGACA TTATCGGACA GCGCGTCGAT GTTTCTCTCA AGCAGGCGAG TATCGGCCAC CATTACGAGC GCTTCAACGG TGAGGCTTCC AGCAACGAAA TCACGCGCCT TGCCAAGCTG GCGCGTGACG CAGGGACGAA TATCGTGGTC GGATTAGGTG GCGGCAAAAC GCTCGATACC GCGAAAGCCG TTGCCGATGA GCTAAAACAC AACGTGGCTA TCGTCCCGAC CGTGGCCTCA ACGGATGCGC CGTGCAGCGC ACTGTCCGTC ATCTACACCG ACGACGGCGT ATTTGAGTCT TATCGTTTTT ACAACAAAAA CCCCGATCTG GTGTTAGTCG ATACTGCTGT ATGCGCGCAG GCACCTGCCC GCCTGTTCGC CTCCGGCATT GCCGATGGGC TGGCTACTTT TGTCGAAGCA CAGGCGGTTT TGCGCTCTCA CTCACTTTCC ATGCTGGGCG GAAAACCCAC GCTGGCAGGT ATGGCGATTG CCGAAACCTG CGAAAAAACG CTGCTAACCT ACGGCTACAG CGCCTATAAA GCAGTGGAGA AAGGCGCGGT CACGCCAGCG GTGGAATCTG TGGTTGAAGC GAATACGCTG CTTTCCGGTC TGGGATTCGA GAATGGCGGG CTGGCAGGCG CTCACGCCAT CCACAACGGT TTTACCGCGA TTAAAGGCGA TATCCACCAT CTCACGCACG GGGAAAAAGT CGCCTACGGC ACGTTAACGC ATATGGTGCT GGAGCAGCGT CCCGATGAAG AAATCGCCCG CTACATCCGC TTCTACCGCG CCATCAACAT GCCAACCCGG TTAAAAGACC TGCATCTGGA AAATGAGCCG TTTGAGAATC TGGTCAAAGT GGGTGAACTG GCATGCAGCG ACGCCGATAC GCTGAAAAAT CTGGACAGCG GGTTAACGGC AGAAGACGTC GCCCACGCGA TTGTTGCCGT CGATGCATTC AGCAAAACTA TCGCTTAG
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Protein sequence | MSHFIFSSPR KYVQGRGVLD ELGEQLKPLG TKAFLMADGI VWDIIGQRVD VSLKQASIGH HYERFNGEAS SNEITRLAKL ARDAGTNIVV GLGGGKTLDT AKAVADELKH NVAIVPTVAS TDAPCSALSV IYTDDGVFES YRFYNKNPDL VLVDTAVCAQ APARLFASGI ADGLATFVEA QAVLRSHSLS MLGGKPTLAG MAIAETCEKT LLTYGYSAYK AVEKGAVTPA VESVVEANTL LSGLGFENGG LAGAHAIHNG FTAIKGDIHH LTHGEKVAYG TLTHMVLEQR PDEEIARYIR FYRAINMPTR LKDLHLENEP FENLVKVGEL ACSDADTLKN LDSGLTAEDV AHAIVAVDAF SKTIA
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