Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0727 |
Symbol | |
ID | 8131652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 847441 |
End bp | 847776 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644864011 |
Product | hypothetical protein |
Protein accession | YP_003016317 |
Protein GI | 253687127 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2913] Small protein A (tmRNA-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.405452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTGTA AAACGCTGAC TGTCGTCGCC GCGGTGGTTG TTATGCTGAC TGCCGGTTGT TCCACACTGG AGAAGGTGGT CTATCGGCCG GACATCAATC AGGGAAACTA TCTGGCACCG GCTGACGTTG CAAAAATTCA CACCGGCATG ACCAAACAAC AGGTCGCTTA TACGCTGGGT ACTCCTATGA TGCAGGATCC GTTTGGCAGC GATACGTGGT TTTACGTCTT CCGCCAACAG CCTGGTCATG AATCGGTAAA ACAGCAGACG CTGACGCTGA CCTTCAGCGG CAGTGGCGTG TTAACCAACA TCAACAACAA GCCTGCACTG GATTAA
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Protein sequence | MRCKTLTVVA AVVVMLTAGC STLEKVVYRP DINQGNYLAP ADVAKIHTGM TKQQVAYTLG TPMMQDPFGS DTWFYVFRQQ PGHESVKQQT LTLTFSGSGV LTNINNKPAL D
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