| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0725 |
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| Symbol | |
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| ID | 8131650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 846485 |
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| End bp | 846931 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864009 |
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| Product | hypothetical protein |
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| Protein accession | YP_003016315 |
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| Protein GI | 253687125 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.242163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAAGA TAAGTCGTTC TGCACTGGTG CCGTTCAGCG CTGAACAGAT GTACAAGCTG
GTGAATGATG TCGCTTCTTA CCCCGCGTTT TTACCGGGTT GTACGGGAAG CCGCGTGATC
TCTTTCTCCG AAGGAGAAAT GACCGCTGCC GTAGACGTTT CCAAAGCCGG TATCAGTAAG
ACATTTACCA CACGTAATAC GCTGACGAAC AACCAGAATA TCAATATGCA ACTGGTCGAT
GGCCCCTTCC GTCAACTGGG TGGCGACTGG CATTTTACGC CGCTGAGCGC CGATGCCTGT
AAAGTCGAAC TGCATCTTGA GTTTGAATTC ACCAATGCCT TGATTGAACT CGCTTTTGGC
AAAGTATTCA AGGAGCTGGC GGGAAATATG GTGCAGGCTT TCACGCAGCG AGCAAAAGAG
GTCTACAGTG TCCGCAATGC AGGTTGA
|
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| Protein sequence | MPKISRSALV PFSAEQMYKL VNDVASYPAF LPGCTGSRVI SFSEGEMTAA VDVSKAGISK
TFTTRNTLTN NQNINMQLVD GPFRQLGGDW HFTPLSADAC KVELHLEFEF TNALIELAFG
KVFKELAGNM VQAFTQRAKE VYSVRNAG
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