Gene PC1_0724 details

Gene Information

• Locus tag: PC1_0724
• Symbol: smpB
• ID: 8131649
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 845847
• End bp: 846329
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644864008
• Product: SsrA-binding protein
• Protein accession: YP_003016314
• Protein GI: 253687124
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAGA AAAAAGCATA CAAACCCGGT TCCGCCACCA TTGCGCAGAA CAAGCGCGCC 
CGTCACGAAT ACTTCATTGA GGAAGAATTT GAGGCTGGCC TTGCTCTGCA AGGATGGGAA 
GTCAAATCAC TGCGCGCAGG CAAAGCCAAC CTCAGCGACA GCTATGTCAC CTTCATGAAC 
GGTGAAGCTT ACCTGTTTGG CGCCACCATC ACGCCGCTGA ATGTAGCGTC ATCACACGTT 
GTTTGCGATC CTATCCGCAC GCGCAAACTC CTGCTCAACA AACGCGAGCT AGAGTCGCTG 
TTTGGCCGCG TCAGTCGTGA AGGCTATACG GTCGTCGCGC TGTCCATGTA TTGGAAAAAT 
GCCTGGAGCA AAGTCAAAAT TGGCGTAGCG AAAGGTAAAA AAGATCACGA CAAGCGTGAT 
GACATTAAAG AACGTGAATG GAAGTTAGAC AAAGCCCGTA TCATGAAGAA CGCCAATCGC 
TAA 

 

Protein sequence

MTKKKAYKPG SATIAQNKRA RHEYFIEEEF EAGLALQGWE VKSLRAGKAN LSDSYVTFMN 
GEAYLFGATI TPLNVASSHV VCDPIRTRKL LLNKRELESL FGRVSREGYT VVALSMYWKN 
AWSKVKIGVA KGKKDHDKRD DIKEREWKLD KARIMKNANR